FMO03321.5prime Sequence
1101 bp (942 high quality bases) assembled on 2008-07-09
> FMO03321.5prime
GTATAGCATACATTAAACGAAGTTATCAGTCGACATGGTCTTCGGTGCTA
TGTTGCTGACGGGCAACGGGCTCAAAGGTCCCAAACAGCAGCAACAGCAA
CATCAGCAGGAGCCGCAGCAGCAGCAGCAGCAATCGCAACAGCAGCAGCA
AGAGCAAAAGAAACCGGCGCCCATTAAATCCTCCAGCAAGGAGCAGGAAA
CGCAGCCCATTGCAGCCGGGTATTATGCCCTCGGCATACGCATACCCAAA
TCTCCATCGTTTCACAGCGGCCTAGATCAGCTGGCCGACGACGAGTTGGA
CGATCAGGTGCAGGATCAGCAGCAGGAGCAGCAACAGACCGGCAGCCGAT
TCAGGTTTAGCAGCGTGGAGGAGCTAAAGGCCAAGTTCGAGGGGCGGAAA
ACGCCCCTCTCACCGCCAGAGGCAGCAGCAGGAGGAGCAGCCGGATCCGG
AGCACCCACCACATCCTCCTCACCATCGTCCTCGTCCACCAGCTCCAATT
CGTCGGCCTCGGCCCTGTCCTCGCTTTCACAGGCGGCCTCATCCTCGCTA
GCCTCGGCGGCTGCTAACTCCTCGGCCTCATCCTCGGCCGCCACATACGG
TGGTGGAGCGAATTCGGCTGCAGCTGCACTGATTGCCTCCTCGCCATTTG
GATCGCAGTCCTCCACTTCTTCGCTCTCGCTATCCTCGAATGCCGGCATG
TCGAAGAACGCGGCAGAGCAGGATCTGGATCTGGATCTGGAACAACGTCA
ACGGGCGCTGCTAGCGGCAGCAATTCACTTGTGTCCACTTTGGCACAACA
TTTCTCGGCGGCCACATCCGCCGCAGCATCGGCGGCAGCCGCTGCGGCAT
CCTCTGCCTCGGGCGGCGTCCTCCTCGTCAGCTTCCTCCTCATCCACCGC
CACCAACAACGCAGCCAGCAACTCCATCGCCGCCAGCAAGTCACTTGTGA
GCGGCGGCCGCGGCCATAAAGAACATACTGATTGCCCACCAAGAGTGTTG
GGTACTAGTGCTGCGGCAGCGGCAGCAGCGCGGCCACCTTCTCCTTATTC
ATCCCCATCCTCTGCTGCGGATGAGACCGGCGTTCGGCGCCCACCGTCGT
T
FMO03321.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PP2A-B'-RB | 3549 | CG7913-RB | 266..1326 | 35..1100 | 4920 | 97.9 | Plus |
| PP2A-B'-RA | 3269 | CG7913-RA | 266..1326 | 35..1100 | 4920 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18173285..18174190 | 35..940 | 4420 | 99.7 | Plus |
| 3R | 32079331 | 3R | 18174538..18174666 | 939..1070 | 325 | 91.7 | Plus |
Blast to na_te.dros performed 2014-11-28 19:40:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2530 | 276..497 | 149 | 54.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1057..1133 | 289..364 | 112 | 62.3 | Plus |
FMO03321.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:51 Download gff for
FMO03321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PP2A-B'-RB | 263..1310 | 32..1083 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:06 Download gff for
FMO03321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PP2A-B'-RA | 263..1310 | 32..1083 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:55 Download gff for
FMO03321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PP2A-B'-RA | 263..1310 | 32..1083 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:55 Download gff for
FMO03321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18173282..18174190 | 32..940 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:06 Download gff for
FMO03321.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13999004..13999912 | 32..940 | 99 | -> | Plus |
