FMO03328.5prime Sequence
1259 bp (758 high quality bases) assembled on 2008-07-09
> FMO03328.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGACAGACGCCGCTG
GCAATGCGCTGGCCGAGAAGGGCCTACCGGAGATGAAAGGCTGGCTGCTA
AAGTGGACCAATTACATCAAGGGCTACCATCGGCGATGGTTCGTGCTATC
CAAGGGCGTGCTGAGCTACTACCGCAACCAGTCGGAGATTAACCACACGT
GCCGGGGCACCATATCGCTTCACGGAGCCCTCATCCACACGGTCGATTCG
TGCACGTTCGTAATCTCGAACGGCGGCACCCAAACGTTCCACATCAAGGC
CGGCACCGAGGTGGAGCGCCAGTCGTGGGTCACCGCCCTGGAGCTGGCAA
AGGCTAAGGCAATCCGGGCCATCGAATGCGAGGAGGAGGAGGAGACGGAA
ACGGCACATGTGGTGCCCAGCCAGGAGATCAGCTCGGTGGTCCGAGATCT
CACCGATCGGCTGGAGAGCATGCGTACCTGCTACTACCTGATCACCAAGC
ATGGCGCAGCCTTGCAGCGCGCTCTCAACGATCTGGAGACGAACGAGGAG
GAGTCGCTGGGCAGCCGCACGAAGATCGTCAACGAGAGGGCGACCCTCTT
CCGGATATCCTCCAATGCGATGATCAACGCCGGCAACGACTACCTGCACA
CGGCAGAGGCACAAGGCCATAAGTGGTCCAAGATGCTACACCACGAGCGC
GAGCAACGCCGGCGGCTGGAGGAGATCATCTAGCAGATGGCATAGCATCA
GTCGCAGATGGGAGCATGCCGCCGTACTGGTGCGCCAGAACATGCCGGTG
TCATCCACCTCGGGGGCAGGCACCGCCGGCTTCCTTGGTGACCTCAGATG
AGGAGATGGAGTTTTTCGATGCCGAGGAGCACGGCTATTCAGGCAGCGGT
CGCTCCTCTGAGTCTTCGGATTGCTAGCGGGGTACTTTTATACTTTAAAG
ATTGCACACGCGCCTTATAATACCTAGGACCAGTGGGAGGGCCATTGGAG
GGCTGTTCCTTCGAAAAGTGACAGCAAAGTGCTCACCGTGCTAAACGGTG
CAACATGGTGGTGCTTGGTGTAGTTGCGCCCACGGTATCTATCGGGCGGT
TAGGGCCAACAACGATGAACAACTGGAATAAAGGCATTGCCGGTCCATGG
AGAGAGAATTTACTTCTACGGCGCAATGGAATCTGGATTCTGTATTAAAG
AGTCTACCGAATCGGTTGTTCCCTAAATATATACTGCGAAACACGCACCG
TCGCCATCC
FMO03328.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osbp-RA | 3248 | CG6708-RA | 363..1469 | 34..1154 | 4505 | 94.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24936955..24937860 | 941..34 | 4260 | 98.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:41:12 has no hits.
FMO03328.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:30 Download gff for
FMO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osbp-RA | 378..1303 | 34..964 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:40 Download gff for
FMO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osbp-RA | 363..1288 | 34..964 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:17 Download gff for
FMO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osbp-RA | 363..1288 | 34..964 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:17 Download gff for
FMO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24936935..24937864 | 31..964 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:40 Download gff for
FMO03328.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20762657..20763586 | 31..964 | 97 | <- | Minus |
