FMO03331.5prime Sequence
1223 bp (1032 high quality bases) assembled on 2008-07-09
> FMO03331.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTATCTGAACCA
CCTGCCGCGGACACAATGGAAGTACCTACAATACCTTCTGCGAGTGCGTC
AGCTTCAGCTCCTGCGACGGCACGTTAACATTGGCGCAAAGCCGCCCATC
CAAACAGCTGCCTTGCTGCCGGCATTGGGCCAAAAACTGAGGAAGCACTC
GCAGCTGGTGAACGGAGATCTCCAAGACAAGTTTGGCGTGCCACGGGAAC
AGGATGCTCTTCTAACCCGACTGGAGGAGGCCAAGACGGGTAACCAGATT
TTAGATGTGTTGGAGAGCTGTGACGGCCTGCAGAGCTCCCATGTGGTGAT
GGGAATCTCACTGCTGTGGAACATCTATCACGACGCGGAGCAGGCAAGTA
AAGATGCCATCACGGATCGCGTGCTGCTTAACGTGCTCCCAAAGTTGGCC
CCTTATGTACACCAACTGGAGATCGATGATCTCAGTAGATGCTACCTGTA
CCTGCGCAAAATGCATATACCAAACTCCGAGGCAGTCGTGGAGGCCGTGC
TGACGAGATCTCTTCAATTAATCGAGTCACAAGTTGATGACGAAGTCATT
CCCTTGACCTCCTTGTCTCGCCTCTCGGTGGGCATCAACTTGGAACGCGA
CTTCTTCACTCCGCTTGTGTGTAGGAACTTTATTCCGCACCTGGAACATC
ACATCAATTGGTGTCGCAGCGCAGAGCAGGTTCGCCTTCTGTCCACGTGC
CTCTTTCAGCTACACTTTCTCATTGATGAGGAGCTGTTTACGCGCTTCAA
GTTGCGCTTGACTGAAATGATGCAAAGCGGCGTCCTCAGCAGCGAAACCC
CTAAAGGCTCTTCTGAAGTGATCCACATGCTGAATATTCCAGTGTGGTCG
CAGACCCCACACCCATTGATTCGGGAGGTCATGCTGGTCTTGCGACCTTG
CATACACCAAAATGGAGTCTGCAGATCTAAGAAGCATTTGTCGCACATTT
TGGCATATCAGAACCCGCCGCACTGATAGAGCCGCTCAGAAAGCCCTTGA
AAAGTTACCTACAGGAAGAAGGCACTGCTGACGCCCTGTTATTGTGCAGT
TCCATTTGACACGCCACTGCAGAGAGACTAGTCCTTCATCATTAAGGGAC
TGCCTTATCTCGAAAGGCTGCCACGACCGATGCAGCGAACATATTCACCG
CTTCGCGCCGCGCCCTAAAAGGT
FMO03331.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31643-RB | 2842 | CG31643-RB | 86..1206 | 36..1153 | 5150 | 97.9 | Plus |
| CG31643-RA | 2938 | CG31643-RA | 86..1206 | 36..1153 | 5150 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6038202..6039298 | 36..1132 | 4910 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:38:00 has no hits.
FMO03331.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:49 Download gff for
FMO03331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-RA | 31..1148 | 23..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:16 Download gff for
FMO03331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-RA | 31..1148 | 23..1141 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:38 Download gff for
FMO03331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31643-RA | 75..1192 | 23..1141 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:38 Download gff for
FMO03331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6038191..6039323 | 23..1155 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:16 Download gff for
FMO03331.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6038191..6039323 | 23..1155 | 97 | <- | Plus |
