FMO03338.5prime Sequence
388 bp (344 high quality bases) assembled on 2008-07-09
> FMO03338.5prime
ATAGCATACATAATACGAAGTTATCAATCCACATGGCAGCGACGCCAGCG
CCAGCAGTGACGCCGGCAGCGACAGCAACGTCGGCTGCGGCCAAAATTCC
TGTGAATCCCGTGTCCCCCGAGGAGGATACCCTTCTGCGGGGCCTCAACA
AGCTGCGCAACGAGGAGAAACTCACGGACGTCACTCTGATCGTCGAGGAG
CACCGATTCAAGGCTCACCGCGTCGTCCTGGCAGCCAGCAGTGACTACTT
TTGCGCCATGTTCGCCGACTGTGCCATGATTGAGTCGCGTAAGGACGAGA
TAAATCTCTACGGTATTAAAGCCAGGGCCATGGGCTCGATCATTGACTAC
ATATACACATCGATGCTGGAACTGAACTACAATAACGT
FMO03338.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1812-RA | 3229 | CG1812-RA | 364..718 | 32..386 | 1745 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20511907..20512088 | 32..213 | 895 | 99.5 | Plus |
| X | 23542271 | X | 20512900..20513075 | 211..386 | 865 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 22:36:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7429..7484 | 35..96 | 107 | 69.4 | Plus |
FMO03338.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:07:33 Download gff for
FMO03338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1812-RA | 356..717 | 26..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:45 Download gff for
FMO03338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1812-RA | 359..720 | 26..388 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:50 Download gff for
FMO03338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1812-RA | 359..720 | 26..388 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:50 Download gff for
FMO03338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20511900..20512087 | 25..212 | 97 | -> | Plus |
| X | 20512902..20513077 | 213..388 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:45 Download gff for
FMO03338.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20382927..20383114 | 25..212 | 97 | -> | Plus |
| arm_X | 20383929..20384104 | 213..388 | 98 | | Plus |
