FMO03345.5prime Sequence
1056 bp (832 high quality bases) assembled on 2008-07-09
> FMO03345.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGCACAAGACT
AGCAACCGTCGCAGCAGCGACCTGGAGTGTCCACTTGCTTCATTGGGCCG
CAACAGCAATGCGGTACGCGACCACTACCACCACCCGCATCCGCTGAGCT
CCAGTCCACTGGATCCACAGGCCTACAAAATGATGTCCCGCAAGTCACCC
AATCCCGGCCTGGAGGTGGCCGAAGCGCTGGCCTCGCGCAGCTCCACGCC
GCCCAGCGACCAGGCTGGGGCATCCTCGACGGCGGCGGCGGCAGCAGTGC
TCCATATGGTGCAGCAAAAAGCGGCGACCTTTGAGTTGAGAGGCCGCCAC
TCGCGACCAACCGAGCAGCAGACCAGCTATGGAGCCCATTCCACGGCTTC
GGTGGGTAGGCATGCGAAGAAGTACCCAGAACTACCAGCTCCAGCGTCGA
GGAACGTGGCTCCCGTACCACAGCCGCGGAACTTCCTAACACTAGAACAT
GTCCTGCAATTTGGAACCCAGCGACCCAGTTGGATGCACGGCAACAGTGC
GGACACGGAGGATTCGAGTGACAACAACGCGGGTGGCGGTGGAGCTGGAA
GTGGCAGTGGTGGAGCTGGAGGACGGAGACGTGCCCAAGGTGGCCGCTGC
AGTGTGCCCACTGTACTCAGCAGCAATGGCAGCGGCGGCAATGGAGCCCA
GTACCTGCTGGACAAGAAAATGGAGTCACTGTATCTGGGTAACGCCCTGA
GAACCCTTCCCTTAGGCGCCGAAGCGAGTCAGTTTCCAAAACGAACGCTA
CTACCTGGAGGATTACAGCAGCGGCAGCGGGAACGAGCGACTGACAGACG
CCTGCATCATCCGCGCACCTCCAGTCCCAGCGAACAAGTGGATCGGATCG
CTACCTCCTAAACGGCACTCCTACTCGAACCGCTTGCACTCCAAGGGACA
GAGCCTCTTGGACGAGCTGTGCACCTGGGACGCTTCTCGCCCAGCTTGGA
TGAAGGCACGCACACTGGTCTCCACCCTCCTCCAGGGTCACTATTCAGTG
GCGGAG
FMO03345.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4221-RA | 3176 | CG4221-RA | 473..1500 | 35..1056 | 4690 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15929975..15930786 | 35..847 | 3985 | 99.6 | Plus |
| 3R | 32079331 | 3R | 15930845..15931007 | 848..1007 | 530 | 92.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:10:12 has no hits.
FMO03345.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:05:54 Download gff for
FMO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4221-RA | 454..1475 | 28..1047 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:09 Download gff for
FMO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4221-RA | 469..1490 | 28..1047 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:51 Download gff for
FMO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4221-RA | 469..1490 | 28..1047 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:51 Download gff for
FMO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15929971..15930786 | 28..847 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:09 Download gff for
FMO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11755693..11756508 | 28..847 | 99 | -> | Plus |
