FMO03348.5prime Sequence
660 bp (655 high quality bases) assembled on 2008-07-09
> FMO03348.5prime
TATAGCATACATAATACAAAGTTATCAGTCGACATGACTGTGATAATGGT
GGACGGGTTCGCCCTGTGGCTGCTCTACAAGCTGTTCCTGTCTCCCTGCT
GCCTTCTCCTGTGGCACGTGCTTAAACTGTCTACCGTCCTCTTTACCTTT
GCAGACAATAACGGCGCCCGCAAGCAAGCGGAGCACCCGAACAATCAGTC
GCACCACATCAACCACCACAATCATCAGCATCCGACAAGCAATCCCAATG
AGCTGCCCAAGCCGAATAGGGTCCTCTATCCGCGGGAGAACATACGCATT
GGCTGGAAGCAGTCGGAGCGCAAATGGCAGGTGGGCACGGGCATGATCAA
TGTGGGCAACACCTGCTACCTCAACTCAACGCTTCAGGCGCTCCTGCACA
TACCCGCCCTGGCCAATTGGCTCGTTTCGGAGCAGGCGCATCTGGCTGAC
TGCAATGTGGCCGAACCTGGCAGCGGTTGCATCATTTGCGCCATGACCAA
AACACTTTTGGCCACCCAAAGCAATCAGTCGGCCGTCAGACCCTTCCTCA
TCTACTCGAAGCTAAAGCAGATCTGCAAACACATGGTCGTTGGTCGCCAA
GAGGATGCTCACGAATTTCCTGCGCTTCCCTGGTCGAGGCCATGGAGCGG
GGCGTTATTT
FMO03348.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| scny-RJ | 4538 | CG5505-RJ | 333..948 | 34..651 | 2995 | 99.2 | Plus |
| scny-RB | 3512 | CG5505-RB | 333..948 | 34..651 | 2995 | 99.2 | Plus |
| scny-RI | 3644 | CG5505-RI | 150..647 | 152..651 | 2405 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5771497..5772112 | 34..651 | 2945 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:10:52 has no hits.
FMO03348.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:27:40 Download gff for
FMO03348.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Usp36-RB | 333..955 | 34..660 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:19 Download gff for
FMO03348.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scny-RB | 333..955 | 34..660 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:10 Download gff for
FMO03348.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| scny-RB | 333..955 | 34..660 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:10 Download gff for
FMO03348.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5771484..5772119 | 10..660 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:19 Download gff for
FMO03348.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5764584..5765219 | 10..660 | 96 | | Plus |
