FMO03383.5prime Sequence
1245 bp (135 high quality bases) assembled on 2008-07-09
> FMO03383.5prime
GCATACATTATACGAAGTTATCAATCCACATGTCGGTGAACATGAACTGG
ACGTCTCCAAAAATATGGGCCGCTTTGTTTGTGACCACCCTATGCCTGTT
GGATACACGGGCCGCCTGGGCAAAAAAGCTAAATGCGAGTCAAGCTTTTG
ACCACACGTGGAACACAGCATCCGATTTGGAAAATGAACTGGAACAACAA
AAGCGATCGAATGTCCAAAGTGCAGGAGGAGGAGGTGGCGCGGGCGGCGG
ACCTGACCAGTGGTCGGCCTGGTCTGATTGGTCAACCTGTTCGCACACCT
GCGACGGAGGCATCATGCATCAAATGCGTAGGTGCGGCAGTCCTGTGCCT
TGTCGCGGGGAGAGCACCCGCTACCGCATTTGCAACTTGCTCCCTTGTCC
GGAGCACCACGACTTCCGCTCCGCCTATGCTCCGCCTACAACGATGTTCC
CTACCATGGCACCCTGTACAAGTGGACTCCGCATTATGATTACCTCGAGC
CCTGCGCGCTTACATGCACAGGACATCCTGCACATCTTGTCGAAGACATT
TCGCGGGAGACTGGAGACGGCAATGCAGATGAGGCTGAGCACTACGACAA
GCAGAGCGTCATTGTGCAATTGTCTGCGAGGGTGCCAGACGGAACCCGTT
GTCGTTCCAGCAGCCTAGATATGTGTATCCAAGGAAAGTGTCAGCGTGTT
GGCTGCGATTTAAAAATCGGATCTACAAAAAAAATCTACGGCTGCGAATG
TGCGGCGGAAATGGAAACTCCTGCTCCCCACTGCTTTTTTATCTGGGAGA
TGGCACCGATGTCAACTGCTCTGTAACCTGTGGAAGCGGTTCCATATGTC
CCGTTCAATATGCAGGAATCGCCTACCCACGCCAATGTCCATGATACCCT
CTGCATCGTTATTTAATCGGTCGGGAGGCGTCGTGGAACATGAAATACTA
AAGATTATTCCTTCCCGGTGGATAACAGACAATTGCAGCACTTGCAAACC
GCCATTTGTAGTCCAGCTTCTGGGACCTATTGCTGGCCTGTTGCTGAAGT
AATTCTAAAGTCTATCATGACGATGGTAGACAGATTTACATGTAACGACT
CAAACCAAACACGAAAACAAAAATACTTGTTCTATTATCATGCAGGTTCC
TCTGGCATGATGCAAAACTTGAACCGTTTTTCGATTCTTTGGAAGGCTAT
TATCAACGTTGTGGCCCGAAGCCAAATTATATAATCACGGCAAGC
FMO03383.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31619-RE | 5688 | CG31619-RE | 626..1610 | 30..1013 | 3745 | 92.8 | Plus |
CG31619-RD | 5477 | CG31619-RD | 433..1417 | 30..1013 | 3745 | 92.8 | Plus |
CG31619-RG | 5351 | CG31619-RG | 433..1417 | 30..1013 | 3745 | 92.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21700855..21701179 | 195..518 | 1290 | 93.8 | Plus |
2L | 23513712 | 2L | 21701764..21701938 | 520..694 | 800 | 97.1 | Plus |
2L | 23513712 | 2L | 21700671..21700782 | 83..194 | 515 | 97.3 | Plus |
2L | 23513712 | 2L | 21704457..21704605 | 693..840 | 465 | 92 | Plus |
2L | 23513712 | 2L | 21688499..21688552 | 30..83 | 270 | 100 | Plus |
2L | 23513712 | 2L | 21710572..21710638 | 846..911 | 195 | 89.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:14:17 has no hits.
FMO03383.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:27:23 Download gff for
FMO03383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31619-RC | 397..1386 | 22..1013 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:19 Download gff for
FMO03383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31619-RG | 428..1417 | 22..1013 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:48 Download gff for
FMO03383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31619-RG | 428..1417 | 22..1013 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:48 Download gff for
FMO03383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21701764..21701938 | 520..694 | 97 | -> | Plus |
2L | 21704459..21704603 | 695..838 | 91 | -> | Plus |
2L | 21700855..21701180 | 195..519 | 93 | -> | Plus |
2L | 21688494..21688552 | 22..83 | 93 | -> | Plus |
2L | 21700672..21700782 | 84..194 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:19 Download gff for
FMO03383.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21688494..21688552 | 22..83 | 93 | -> | Plus |
arm_2L | 21700672..21700782 | 84..194 | 97 | -> | Plus |
arm_2L | 21700855..21701180 | 195..519 | 93 | -> | Plus |
arm_2L | 21701764..21701938 | 520..694 | 97 | -> | Plus |
arm_2L | 21704459..21704603 | 695..838 | 91 | -> | Plus |