FMO03395.5prime Sequence
1243 bp (983 high quality bases) assembled on 2008-07-09
> FMO03395.5prime
CGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGCCCGCCTGATA
CGAATCCACTTGAAGCACGTTGAAACTACTGTGCTCTTGCTCAGGCGGAG
GACGCAGCAGAGGACCAGGCGGCGGTTTAGGATGCTGCGCACGTTTTTTA
TGCGCCAGATGATGGAGATGCACTCGAACTACCTGCACACTTACGCCATG
CTGCGCCTGAAGCATTCCCAAGTCGTGGACACGGAATCGGAAACCAGCGA
TGTCGATGAAGAACCACACGACAAGATTGGCGTGCCCTGCACCTTTCCCA
GCTTCGATTCCCATTTCTTTGAGCATGTGATTCCCGAGCTGAGCGAGGAG
GACTTTCTCAACACACTCCATGTGACACGGGGAACCTTTGAGACCTTGTG
CAAGCAACTTTCTCCCACTCTGCGGACGTCAGATGAACTGACTCAAAGAG
AGCCAGCAATTTCTACCGAAAAGTGTGTGGCTCTGGCTCTGAACTTCCTG
GCCAGCGGCGAGCGGCTCTCTTTGATTGCCGAGAGATTTTCTCTGCCCCG
TCCAAGGACCATCAAGTGTTTAAAGGTCTTTTGCAACGCCGTTATGTCCA
CTTTGGGGCGGGCGCTTCGCCAATTGCCCCAGAATCCAGTGGACTGCAAT
AGTGTGGCCAAGGGGTTCCAGCGTGAAAGCAACATGCCCGCCGCACTCGT
CGGCGTCCTTGGCGTCTGCTCCATTCCCATCCGATCCACTGGCGAGGCCA
AGAACTCGATACTGCGCATGGAGTATCTGCTCGACGATCGAAATGCTCTT
TCGGGAGCTGCAATTGGGGATGTGGCTTGCGTGCCACCCTGGGACCCATG
TTTTCCCACGCACCCAATACTCTTACCGCAATCCCTGAATTCCGCATTAA
TTCCGACTAGTTCCGGCCTTTGTCTTGGGCCCGGTGTACAGAATTATCCA
CTGCGTCCTGGCTTTTGCAGCGCTTATACTGATCCGACCAGCTCCGCACG
AACCACGACTTCAACGAGGTTGCCGAGAACTGCAGAATTGAAGTGACTGC
CTACTGCATTCGCCTCATGTTCCCGCTTGGAACTTTCTTTAACCAAACTT
AGAACATAGCATGCATACGGGCCTCTTGCATCTACACACAACCGCCAGTA
ATGGCACAATCTACCTGGAAGACCTGAACCGAACACCATGCTGTAGAGTG
GCACTCTGGGGTGACGTGGTCCAATTTCTCCGGGCACAGACTT
FMO03395.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32095-RA | 1526 | CG32095-RA | 147..1281 | 36..1177 | 4905 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11824554..11825586 | 1070..36 | 4560 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:43:14 has no hits.
FMO03395.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:01 Download gff for
FMO03395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32095-RA | 88..1101 | 36..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:47 Download gff for
FMO03395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32095-RA | 147..1160 | 36..1050 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:04 Download gff for
FMO03395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32095-RA | 147..1160 | 36..1050 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:04 Download gff for
FMO03395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11824573..11825586 | 36..1050 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:47 Download gff for
FMO03395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11817673..11818686 | 36..1050 | 98 | | Minus |
