Clone FMO03404 Report

Search the DGRC for FMO03404

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:34
Well:4
Vector:pMK33-CFH-BD
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03404.5prime Sequence

465 bp (465 high quality bases) assembled on 2008-07-21

> FMO03404.5prime
ACTTCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGACCCACAC
ATACAACGTATATTCTCACATTGCCATTTTCATTTCAATTCATTTCATTT
ATTTATGCAATATTTTATGTGCTCATTCATTTTTTGCCCGTTCCGTTGTC
GTCGGTGTGCCCGATTGTTCTATTAATTTGTTGTCGCTCCTCGTTCGGGC
TCCTCGTGGTCTCCGTACCATCCAGCCCATCCAGTCCATCCAAGCCATCC
TGGTCGGTGGCGTTTTGGCCCGGTTATTTGCCATCCGCCTCGGTTCGGTT
CCATTGTCAATTTGTTGGATACACGTCTATTTGTACCTAGTATTGTATGC
GCATAAAATTCGTGCCATAAACCCCATTCGTCTTAATTTGTATGACTGTT
TTGTTACGGTTACGGTTAGGCTCTGTGTTTTGTGTTCTGTATTTTGTGCA
AGCTTTCTAGACCAT

FMO03404.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:32:32 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21328585..21328993 447..39 2045 100 Minus
Blast to na_te.dros performed 2014-11-28 19:32:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dnet\R1A 1757 Dnet\R1A NEOR1A 1757bp 1063..1115 255..202 141 75.9 Minus
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 1986..2010 424..448 107 92 Plus

FMO03404.5prime Sim4 Records

Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:58 Download gff for FMO03404.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 21328577..21328993 39..455 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:58 Download gff for FMO03404.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 21328577..21328993 39..455 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:17 Download gff for FMO03404.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17154299..17154715 39..455 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:17 Download gff for FMO03404.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17154299..17154715 39..455 99   Minus