FMO03410.5prime Sequence
246 bp (246 high quality bases) assembled on 2008-07-21
> FMO03410.5prime
TCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGCGTCTAACTAA
CGTTTTGTTCAAAAAGGTGAAGAGCAAGCGCATCATGGTCGTACTGGAAA
GTGTGGTCAGTGGACATCAGTTTAATGCTTTTCGCGATCGCTTGGCCGAC
AAATTGGAGATAATACGCTTCGATCCGTACATTCAACAGGAAAGCCTTTA
TCGTGAACGCAAGAAAATCCGCAGCGCCGCAAGCTTTCTAGACCAT
FMO03410.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL33-RA | 349 | CG3712-RA | 101..292 | 37..228 | 960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4321931..4322034 | 181..78 | 520 | 100 | Minus |
| X | 23542271 | X | 4321821..4321867 | 228..182 | 235 | 100 | Minus |
| X | 23542271 | X | 4322090..4322131 | 78..37 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:18 has no hits.
FMO03410.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:26 Download gff for
FMO03410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL33-RA | 88..296 | 25..233 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:55 Download gff for
FMO03410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL33-RA | 58..266 | 25..233 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:26 Download gff for
FMO03410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL33-RA | 88..296 | 25..233 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:26 Download gff for
FMO03410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4321817..4321867 | 182..233 | 96 | <- | Minus |
| X | 4321931..4322034 | 78..181 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:26 Download gff for
FMO03410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4215850..4215900 | 182..233 | 96 | <- | Minus |
| arm_X | 4215964..4216067 | 78..181 | 100 | <- | Minus |
