FMO03411.5prime Sequence
247 bp (247 high quality bases) assembled on 2008-07-21
> FMO03411.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCTGGACGCG
AGGGCGGTAAGAAGAAGCCTCTGAAGGCGCCGAAGAAGGACTCCAAAGAC
CTGGACGAGGACGACATGGCCTTCAAGCAAAAGCAGAAGGAGCAGCAGAA
GGCTCTGGAGGCGGCCAAGGCGAACGCCTCAAAGAAGGGTCCTCTCGTAG
GAGGCGGCATCAAGAAGTCGGGAAAGAAGGCAAGCTTTCTAGACCAT
FMO03411.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13364-RA | 387 | CG13364-RA | 54..252 | 38..236 | 965 | 99 | Plus |
| CG16824-RA | 407 | CG16824-RA | 71..262 | 38..229 | 555 | 85.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 624892..625090 | 236..38 | 965 | 99 | Minus |
| 2L | 23513712 | 2L | 13293079..13293270 | 38..229 | 555 | 85.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:31:11 has no hits.
FMO03411.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:33 Download gff for
FMO03411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13364-RA | 47..252 | 31..236 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:56 Download gff for
FMO03411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13364-RA | 45..250 | 31..236 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:59 Download gff for
FMO03411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13364-RA | 47..252 | 31..236 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:59 Download gff for
FMO03411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 624892..625099 | 26..236 | 95 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:33 Download gff for
FMO03411.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 518925..519132 | 26..236 | 95 | <- | Minus |
