FMO03413.5prime Sequence
311 bp (311 high quality bases) assembled on 2008-07-21
> FMO03413.5prime
CTTCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGCGTGTAATC
TTCCTCATCGTTGTGCTCGCCATGGTGGCTCTGGCTGCTGTCCAAGGACG
TCGTCCTCCAGGACTTCCGCAGGGAGGTCTGGGACCACTTCAGGGCTCTG
GAGGACTCCAGCCGCCGCAGGGAATACCTCAGGGACCTCCCCAGGGACTC
CCACAAGGACCTCCCCAAGGTGGCAACTCATCCTCCTCCGAAGACTCTTC
CTCCCAGGAGAGCTCCAGCGAGTCCTCCAGTGAGGCGTCCGCCGCAAGCT
TTCTAGACCAT
FMO03413.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:12:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1678-RB | 434 | CG1678-RB | 56..310 | 39..293 | 1275 | 100 | Plus |
| CG1678-RA | 392 | CG1678-RA | 56..310 | 39..293 | 1275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:12:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21402463..21402717 | 293..39 | 1275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:12:16 has no hits.
FMO03413.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:10 Download gff for
FMO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1678-RA | 17..276 | 34..293 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:15:35 Download gff for
FMO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1678-RA | 17..276 | 34..293 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:49 Download gff for
FMO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1678-RA | 51..310 | 34..293 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:49 Download gff for
FMO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21402463..21402726 | 23..293 | 96 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:10 Download gff for
FMO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21273490..21273753 | 23..293 | 96 | -> | Minus |
