Clone FMO03415 Report

Search the DGRC for FMO03415

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:34
Well:15
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17567-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03415.5prime Sequence

248 bp (248 high quality bases) assembled on 2008-07-21

> FMO03415.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTACAACTGCTG
CGTGGAACTCTGCTGTGTACCCTGCACCCCAGCCTACATCCAGTGCTCAT
TTATGCCCTGCGGACCAAGAGGCTGTTGCTGAAGTGGGGATGTGCCAGGT
GCCGAAACACGTTCAACCATATTGTACCTGAAACACTCGTAGATACCCAA
CATGTCCCAATAAACGAATTTTATAAATGTGCAAGCTTTCTAGACCAT

FMO03415.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG46059-RC 596 CG46059-RC 401..595 36..230 975 100 Plus
CG46059-RB 409 CG46059-RB 214..408 36..230 975 100 Plus
CG46059-RA 405 CG46059-RA 210..404 36..230 975 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19183094..19183288 230..36 975 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:40:43 has no hits.

FMO03415.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:12 Download gff for FMO03415.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17567-RA 220..420 32..234 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:20 Download gff for FMO03415.5prime
Subject Subject Range Query Range Percent Splice Strand
CG46059-RA 207..405 32..231 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:20 Download gff for FMO03415.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 19183085..19183291 32..238 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:03 Download gff for FMO03415.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19183085..19183291 32..238 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:03 Download gff for FMO03415.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19183085..19183291 32..238 97   Minus