Clone FMO03417 Report

Search the DGRC for FMO03417

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:34
Well:17
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17738-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03417.5prime Sequence

385 bp (385 high quality bases) assembled on 2008-07-21

> FMO03417.5prime
TTCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGCGTTCCGCGA
TTTTGTTCGGCCTTATTGTTTGCCTGGCTTTTAGCCTTGTCTTGTCCCTG
GAGGAGTCCATCAATCAATCCAATGATCTGTCGTCGGTGGAAAAGGATAT
TGGCCAGGCTGTGGAGTCCGATGTGCGTGCTAAGCGGCAGTTTGGCTTTG
GTGGTCCCTTTGGCGGATTTGGAGGACCTTTCGGTGGATACGGCGGCTAC
GGAGGACTTGGAGGCTTTGGTTATGGACGTCCCTTCTATGGAGGCTATGG
CCGTCCCTTCTATGGAGGTTTCGGAAGACCCTTCTACGGAGGCGGCTTCG
GAGGTCCTTTCTTTGGTGCAAGCTTTCTAGACCAT

FMO03417.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG17738-RA 411 CG17738-RA 31..360 38..367 1650 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12270920..12271249 38..367 1650 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:01:34 has no hits.

FMO03417.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:17 Download gff for FMO03417.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17738-RA 24..371 31..379 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:14 Download gff for FMO03417.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17738-RA 1..333 38..371 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:09 Download gff for FMO03417.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17738-RA 24..371 31..379 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:09 Download gff for FMO03417.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12270913..12271260 31..379 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:17 Download gff for FMO03417.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8096635..8096982 31..379 97   Plus