FMO03419.5prime Sequence
336 bp (336 high quality bases) assembled on 2008-07-21
> FMO03419.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGTTTCGCTCT
GTTTGCTTTTCTAGCACTGTGCTTGCTGGCATTCGTCCTGGCTACTCCGG
CCAAGGACACCAAGAAGCCGGCCACCAACAGTTGCCAGCACAACTGCGGT
GAAGTCTACGAGCCCGTTTGTGCCAAGGCCAAAAACAGCAGCAAGGAGCG
CCTCCTCACCTTTGGCAGCCCGTGCGTCATGGCCAACTACAACTGCCAGC
ATGCCGACGATCCATTCGAGCAGAAGTCCAAGGGCGAGTGCGGCGGTGGA
GTGAGCGTTCGCCTGTCCGCAAGCTTTCTAGACCAT
FMO03419.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:24:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8369-RA | 431 | CG8369-RA | 91..372 | 37..318 | 1410 | 100 | Plus |
| CG8369-RC | 774 | CG8369-RC | 459..715 | 62..318 | 1285 | 100 | Plus |
| CG8369-RB | 479 | CG8369-RB | 166..420 | 64..318 | 1275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8822466..8822666 | 62..262 | 1005 | 100 | Plus |
| 3R | 32079331 | 3R | 8822724..8822779 | 263..318 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:02 has no hits.
FMO03419.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:19 Download gff for
FMO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8369-RA | 79..372 | 25..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:23 Download gff for
FMO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8369-RA | 68..361 | 25..318 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:42 Download gff for
FMO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8369-RA | 79..372 | 25..318 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:42 Download gff for
FMO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8822469..8822666 | 65..262 | 100 | -> | Plus |
| 3R | 8822724..8822779 | 263..318 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:19 Download gff for
FMO03419.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4648191..4648388 | 65..262 | 100 | -> | Plus |
| arm_3R | 4648446..4648501 | 263..318 | 100 | | Plus |
