Clone FMO03433 Report

Search the DGRC for FMO03433

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:34
Well:33
Vector:pMK33-CFH-BD
Associated Gene/TranscriptRpS26-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03433.5prime Sequence

394 bp (394 high quality bases) assembled on 2008-07-21

> FMO03433.5prime
GTATAGCATACATTAAACAAAGTTATCAGTCGACATGACCAAGAAGCGCC
GTAACGGAGGACGCAACAAGCACAATCGCGGCCATGTGAAGCCCGTGCGC
TGCACCAACTGCGCCCGCTGCGTGCCCAAGGACAAGGCAATCAAGAAGTT
CGTCATCCGCAACATCGTGGAGGCTGCCGCCGTGCGCGACATCACGGAGG
CCAGCATCTGGGACTCGTACGTGCTGCCCAAGCTCTATGCGAAGCTCCAC
TACTGCGTGTCCTGCGCAATCCACTCCAAGGTGGTGCGCAACCGTTCGCG
CGAGGCCCGCCGCATCCGCACGCCGCCACTGCGTTCCTTCCCCAAGGACA
TGGCCCGCAACAACCAGAACAGGAAGGCAAGCTTTCTAGACCAT

FMO03433.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:08
Subject Length Description Subject Range Query Range Score Percent Strand
RpS26-RD 1046 CG10305-RD 85..426 35..376 1710 100 Plus
RpS26-RE 1812 CG10305-RE 85..426 35..376 1710 100 Plus
RpS26-RA 640 CG10305-RA 85..426 35..376 1710 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18442721..18443062 376..35 1710 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:40:07 has no hits.

FMO03433.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:50 Download gff for FMO03433.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS26-RC 85..426 35..376 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:23 Download gff for FMO03433.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS26-RB 97..438 35..376 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:10:57 Download gff for FMO03433.5prime
Subject Subject Range Query Range Percent Splice Strand
RpS26-RA 85..426 35..376 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:10:57 Download gff for FMO03433.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18442721..18443062 35..376 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:50 Download gff for FMO03433.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18442721..18443062 35..376 100   Minus