FMO03434.5prime Sequence
415 bp (415 high quality bases) assembled on 2008-07-21
> FMO03434.5prime
TTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGCGCTTCCTAT
TCGCTCTACTTCTCAGCGTGCTCCTGTGTCTGCTCCTGGCTCAGGAGGGC
AGTAGCAGCACATCTACATCCTCGACGGCGACCACATCCACCGACTCCTC
TGCCACCACTACCACGGCTTCATCCGCCACCACCACTACCACCACTGCCT
CCTCCGCATCCACCACGACCACTGCCTCCTCTTCCTCCTCCTCGGCGGAG
GCCAGGAGGCGCAGACGTGCTCGCCGTCGTCGCCTGGCTCGTGAGCGCCG
TCGTCGCCAGGAGCGGAGACAGCGCCAGGAAAAGAGGAGGCGCAGGATGG
AGCAGCTGCTGGTGAGGCAGCGTCGCCTGATCAATCAGCTTCAGGGAGCA
AGCTTTCTAGACCAT
FMO03434.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14454-RB | 445 | CG14454-RB | 17..376 | 38..397 | 1800 | 100 | Plus |
| CG14454-RA | 855 | CG14454-RA | 17..376 | 38..397 | 1800 | 100 | Plus |
| CG32453-RB | 741 | CG32453-RB | 18..377 | 38..397 | 1785 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22692153..22692512 | 397..38 | 1800 | 100 | Minus |
| 3L | 28110227 | 3L | 22697247..22697606 | 38..397 | 1785 | 99.7 | Plus |
| 3L | 28110227 | 3L | 22693532..22693735 | 295..92 | 665 | 90.3 | Minus |
| 3L | 28110227 | 3L | 22696024..22696227 | 92..295 | 665 | 90.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:41:17 has no hits.
FMO03434.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:48 Download gff for
FMO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14454-RA | 10..380 | 30..402 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:18:43 Download gff for
FMO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14454-RA | 2..372 | 30..402 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:50 Download gff for
FMO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14454-RA | 10..380 | 30..402 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:50 Download gff for
FMO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22692149..22692515 | 37..402 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:48 Download gff for
FMO03434.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22685249..22685615 | 37..402 | 98 | -> | Minus |
