FMO03440.5prime Sequence
1191 bp (980 high quality bases) assembled on 2008-07-21
> FMO03440.5prime
CAGTCGACATGACGGACGAAGTGCCCGCCAAAGGCAGCATATTGGGCAAA
CTCGTGCCCGCCCGCTATGTGCTGGCCCTCCTGGGGTCCATCGGCATGGC
CATTGTGTACGGCCTGAAGGTGAATCTCAGCGTGGCCATGGTGGCCATGG
TGAACCACACAGCCATTAAGGCCCACGGAGACGGCGGTGGACATGGGGGA
CACGGCAGCGTCATCCTTTCGAACGCCTCCCAAGTGTCCCTGGTGGAGGA
ATGCAACCCGCCGGGTGGTGCCTCCAATGTGACGGCTAAGGTGGAGGACG
GTCCCTTCGACTGGAGCGAGCCCCTGCAGGGAACCCTGCTGAGCTGCTAC
TTCTGGGGCTATTTGGTCTCGCAGATTCCGCTGGCACACGTCGCCGAGAA
CTTCTCCGCCAAGTGGGTGATGCTCTTCTCGGTGGCCATCAACGTCGTGT
GCACGCTGCTAACGCCCGTCTTTACTGAATTGCATTACGGTGGCCTGATT
CTGATGCGAGTGCTTGAGGGCGTCGGCGGAGGAGCCTCCTTCCCGGCCAT
GCACGTGATGATCGCCTCCTGGGCCCCTCCCACGGAGCGCATGGTCATGT
CCACCATCATCTACGTGGGCACATCTGCGGGTACGGCTCTTTCCATCCTC
CTGGCCGGCGTGTGCTCCGCCCAATGGGGCTGGGAGTCGGTCTTCTATGT
CATGGGCGCACTTAGCTGCATCTGGATGTTGCTGTGGGTCATTCTGGTCC
AGGACAACCCCAACAAGCAGCGTTTCATCAGTCTGGAGGAGCGCCAAATT
GATCACCAGCTCGCTGGGCACCGAACAGAAGACGGAGCACCACCCGGCGG
TTCCATGGGGCAAGGTCTTCACCTCCGTGCCCTTCTGGGCCATTCTCATC
GCCCACACCTGCAGCAACTTCGGCTGGTATTTTGTTCCTCATCGAGATTC
CCTTCTACATGAAGCAGTGCTCAAGTTCAACGTGACAGCAATGCAGCCCT
CATGCTCTGCCTTACTTCCCATGATCATCTTAGCAATCTGTCTGGGCCAG
CTCCTCGACAGTCTTGCAGCAGGTAGAGATCCACACCACCCGACGCCGCA
GAACCGCACCTTCATTGTCACCTGATCCTTGGATGTCTGCTGCTCTTGGC
TATGAATGCGTCACTTATGTAAGGGCGAGTTCTGCTACTCG
FMO03440.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:16:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MFS3-RA | 2029 | CG4726-RA | 171..1228 | 9..1064 | 5045 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:16:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1145444..1146461 | 49..1064 | 4680 | 98.6 | Plus |
| 2L | 23513712 | 2L | 1143371..1143410 | 9..48 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:16:45 has no hits.
FMO03440.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:59 Download gff for
FMO03440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MFS3-RA | 171..1232 | 9..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:26 Download gff for
FMO03440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4726-RA | 169..1230 | 9..1069 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:57 Download gff for
FMO03440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MFS3-RA | 171..1232 | 9..1069 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:57 Download gff for
FMO03440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1143371..1143410 | 9..48 | 100 | -> | Plus |
| 2L | 1145444..1146461 | 49..1064 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:59 Download gff for
FMO03440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1143371..1143410 | 9..48 | 100 | -> | Plus |
| arm_2L | 1145444..1146461 | 49..1064 | 98 | == | Plus |
