FMO03448.5prime Sequence
656 bp (656 high quality bases) assembled on 2008-07-21
> FMO03448.5prime
CGTATAGCATACCTTATACGAAGTTATCAGTCGACATGATGGCCAAGGAC
AAGGGTCTGGCTGTGGCCGGAACGGCGGCCCCCTTACCGGCCGCCCTCGA
CCACGAGTGGTCCGCCGAGGAAGAGCTGCAGCTGTTCCATGCAATGGAAG
GCCTGCGCCCGGTGGGCATCAACAAGCACTTCTACATGTCCTGCATTGTC
CAGCGTCTGTCCAAGTCGCTGAACCGTGAAATGCCCAGCGAGCTGATCTG
GCGCCACCTGGGCACCATGTACAAGCTGAAGGAACTGGACGATCTGGAGT
CGCTGCCCTTTCCCAACGAGGAGCGCGAGTTCAGCCTGCCGGAGCAGGAT
TACGGAACGCTACAGACCAAAAAGACGGTGGAAGTGCATGCGAACGAGGA
GGCTGCAGAGGCACAGTCGGCCCCTCCAACAGCAGAGACCAATGGCAAAG
CTCCACCTGCAACCAAAACGCCGGTACCGACGAATTCCACCAAGGACGGC
GACAAAAAGCCCGTCGCCAAGCCCCAGGAGCAGCTGCCCAAGCGTCCGGC
CAAGCGCACACGCGGCTCCATGTCCAACGAGTCCATCAGCCCCTCCACTA
CGCCGCCGCCGGTGCAAAGCAACAAGCGCCGTCGCATAGCAAGCTTTCTA
GACCAT
FMO03448.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MrgBP-RA | 758 | CG13746-RA | 69..671 | 36..638 | 2985 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8900893..8901307 | 450..36 | 2060 | 99.8 | Minus |
| 2R | 25286936 | 2R | 8900653..8900842 | 638..449 | 935 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:53 has no hits.
FMO03448.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:38:07 Download gff for
FMO03448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MrgBP-RA | 61..671 | 27..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:15 Download gff for
FMO03448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MrgBP-RA | 58..668 | 27..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:12 Download gff for
FMO03448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MrgBP-RA | 61..671 | 27..638 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:12 Download gff for
FMO03448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8900653..8900840 | 451..638 | 99 | <- | Minus |
| 2R | 8900893..8901315 | 27..450 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:38:07 Download gff for
FMO03448.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4788158..4788345 | 451..638 | 99 | <- | Minus |
| arm_2R | 4788398..4788820 | 27..450 | 98 | | Minus |
