FMO03453.5prime Sequence
604 bp (604 high quality bases) assembled on 2008-07-21
> FMO03453.5prime
TTCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGGAGCCAGCCG
AAAGTCCAGAAAAATTAATGAAATTCGTACGCCGCAGTGACGTACTGGAA
TACGTGGGCAACACGAGTGCCGTCGATCTATCGAGCGGTGATCTCTCCGA
CATCGATCTCAAGGACGTGCCGGCCCAACTGGAGGCCACTTTGAAACCGC
GTCGCTATGAAGCAAGCACTTTGTTTAACATTGACCTGGACGATATCTGG
GATCCTAGCTGTCAGGAGGACGAGGTGCAGCAGTACAAGGAGCGCGCCCA
GAAGGAGCAGCAAAAGTTCTTCGACTTTGTAATGCATGCGGCACTGGACA
CGGACAATCGCAAGGTTAGCTTCAAGCCAAACAAGGAGCAGCAGCGTTAC
CTAGATCAGGGACCCAATTTGCAAAACTTCGTGCGAAGCTCGTTGGCTTT
CACAAACGCGGCCATCCGATTTCAGGCGGAGCACGAGGACATGATGGAGC
TGCAGTGCAATATGGACGATCACTACCTATTCATGCGGAACACCATGATC
AACAACGCTATACACCAGAATATGGCCAACCAACGGGCAAGCTTTCTAGA
CCAT
FMO03453.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kmn1-RA | 1002 | CG1558-RA | 45..593 | 38..586 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11571792..11572132 | 586..246 | 1705 | 100 | Minus |
| X | 23542271 | X | 11572191..11572398 | 245..38 | 1040 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:48 has no hits.
FMO03453.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:11 Download gff for
FMO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kmn1-RA | 41..600 | 34..593 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:22:08 Download gff for
FMO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kmn1-RA | 41..600 | 34..593 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:42 Download gff for
FMO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kmn1-RA | 41..600 | 34..593 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:42 Download gff for
FMO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11571785..11572132 | 246..593 | 98 | <- | Minus |
| X | 11572191..11572400 | 34..245 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:11 Download gff for
FMO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11465818..11466165 | 246..593 | 98 | <- | Minus |
| arm_X | 11466224..11466433 | 34..245 | 99 | | Minus |
