Clone FMO03457 Report

Search the DGRC for FMO03457

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:34
Well:57
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14270-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03457.5prime Sequence

629 bp (629 high quality bases) assembled on 2008-07-21

> FMO03457.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGTTCCTC
CGCGTGGGTGGTCGTATAACGGCACTGCGTCAGAGATTGACCGATCGAAT
TCAGATGCCGGAGCGCTTCAAGGGCACGTTCGTGGAGAAGTGGGTGCAGT
ATTGGAACGGCCTGGTCAGGGACTACACAGAGGTGGCAGTGGGTGTTGTG
CGAGAATCCTACACGAAGCCGAAAAAGGCGCTTCTCTATGGAACGGGAAT
GCTGTTCATGTACCAAGCCAATCTGAAGAATCCCGGCGAGGAGGCCTTTA
TGACTCTGCTAAGGGGTGCCACAAATCGAATGATCACAGTGCCGGTAGAA
CTTCAGAATCCCGTGTCCGCCGACTATCTGCTAACCTTGGAGAGGGCGAT
CAATCAAAAGAAACTGCGTCTCCTTTCTCTCGGCATCTGCACGATCCTTT
GGGTGGATCTATACGACGAGGACGACTGCACCTATCCGGCCATCTGTGAA
TATACCAACGTGGGCGTCTTCAACTTCCACGAACGGATCATCGATGTGGG
ATTTTGGAATCAATACTGGCGACTCAAATGGAAGATGCGCAACTATGATG
TCAACTACCTGGCAAGCTTTCTAGACCAT

FMO03457.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14270-RA 774 CG14270-RA 95..667 39..611 2865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:05
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3484712..3485284 611..39 2865 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:23:05 has no hits.

FMO03457.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:53 Download gff for FMO03457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14270-RA 89..667 31..611 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:29 Download gff for FMO03457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14270-RA 85..663 31..611 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:07 Download gff for FMO03457.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14270-RA 89..667 31..611 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:07 Download gff for FMO03457.5prime
Subject Subject Range Query Range Percent Splice Strand
X 3484712..3485290 31..611 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:53 Download gff for FMO03457.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 3378745..3379323 31..611 99   Minus