FMO03462.5prime Sequence
952 bp (842 high quality bases) assembled on 2008-07-21
> FMO03462.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAAACCCC
AGCACATTTTGCAGCTAAGCCAGGAGCAGCGGAGCAGCGTTGTCGACTCT
TTCGACCGGGTGGTCAGCGACATCGATGGCGTCCTGTGGACCTTTGAGCA
GAGCATTCCGCGTGCCGCCGACGGATATGCCGCTCTCGAGCAGATGGGCA
AGCATCTGACCTTCCTGACCAACAACAGCGTTCGCACGTCCGAGCAGTGC
GTCAAACTCTTCGCCAAGATCGGGATGCAGGTGCACCCGGAGCAGATTTG
GCATCCGGCCAAGTCCATCGTTAGCTATCTGCAGAGCATCAAGTTCGAGG
GACTCATCTACATCATCGCCAGCCAGTCGTTCAAGACGGTGTTGCGCGAG
GCGGGATTCCAGCTCCTGGACGGGCCCAACGAGTTCATCGAGGAGAGCTA
CGCCAGCCTGGCCGAGCACATCTTTGGCAAGGAGCCCGTGCGCGCCGTCA
TCATCGACGTGGACTTCAATCTGACTTCCCCGAAGATTCTGCGCGCCCAC
CTGTACCTGCGCCATCCGGAGTGTATGCTCATTGAAGGCGCCACCGATCG
CCTGCTACCGGTGGCCAAGGAAGTGAACATCGTAGGTCCGGGAGCCTTCG
CCTCCATCCTCGTGGAGGCCAGTGGCAAGCAGCCCGATTACGTTGGGCAG
GCCTGGCCGCGAGTTTGGGTGATCTGCTTGTCGAGCATTACCAAATCGTT
CAGCCCCAGTCGGGGTGCTCATGATCGGAGAAATGTTGGCCCCAGGACGT
TAGTCTTTGGAACCCAGTGCGGATGTCCAAAACGCTGCTCGTGCTTCAAC
CGGCGGAATGCAGCAATGAGGAGCTCCTGGCGAGATGATCCGCTACCTCT
TACCCGAACTACTTTGCGATATCGTGTCGATTGTGGCCCAATGCTGTGAG
TA
FMO03462.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15739-RB | 1407 | CG15739-RB | 61..960 | 38..946 | 3870 | 96.3 | Plus |
| CG15739-RA | 1529 | CG15739-RA | 183..1082 | 38..946 | 3870 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11873881..11874265 | 40..424 | 1925 | 100 | Plus |
| X | 23542271 | X | 11874386..11874832 | 424..881 | 1675 | 95.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:51 has no hits.
FMO03462.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:39:11 Download gff for
FMO03462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15739-RA | 183..1029 | 38..893 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:17:19 Download gff for
FMO03462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15739-RA | 59..905 | 38..893 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:34 Download gff for
FMO03462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15739-RA | 183..1029 | 38..893 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:34 Download gff for
FMO03462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11873881..11874265 | 40..424 | 100 | -> | Plus |
| X | 11874387..11874846 | 425..893 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:39:11 Download gff for
FMO03462.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11767914..11768298 | 40..424 | 100 | -> | Plus |
| arm_X | 11768420..11768879 | 425..893 | 95 | | Plus |
