Clone FMO03466 Report

Search the DGRC for FMO03466

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:34
Well:66
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7406-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03466.5prime Sequence

559 bp (559 high quality bases) assembled on 2008-07-21

> FMO03466.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGGTTTTCA
TCTGCCTGATTGCCTGCTTCAGCCTGGCCCAATCCGGATTCATCGGAGGC
GGCGCTAGCGGTGGCTGGTCAACTGGAGGAGGTGGTGGCTGGTCATCCGG
CGGAGGCGGCGCCCCCACAATCGTCAAGGTCATCAGCGAGGAGGCTGGTC
ATGGCGGATGGGCCGGCGGCTACTCTGGTGGCTATGCCCATGCTCCCGAG
GAGGTGAAGATCGTCAAGGTGATCAGCGAGGCGGGCCACTCTCACGGACA
TGATTATGGTCACAGCCACGGCCACGGCTCGGATGTTAAGATCATCAAGG
TCATCCAGGAGGAGGGTCACAGCCATGGCCATGGCCACGGTTACGACTAC
TCCAGCGGAGGCCATGGACACGCACACCACGCCGAAGATGTGAAGATCAT
TAAGCTGATCAGCTCCGGAATCGCCGATGGCAGCAGCCACGGTGGCTGGT
CGTCCGGCGGCGGCTGGTTCTCCGGTGGCTCCGGATGGAACGCAAGCTTT
CTAGACCAT

FMO03466.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG7406-RA 812 CG7406-RA 87..590 38..541 2505 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19077871..19078370 42..541 2485 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:22:18 has no hits.

FMO03466.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:35 Download gff for FMO03466.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7406-RA 75..595 30..551 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:19 Download gff for FMO03466.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7406-RA 75..595 30..551 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:39 Download gff for FMO03466.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7406-RA 80..600 30..551 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:39 Download gff for FMO03466.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19077864..19078380 34..551 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:35 Download gff for FMO03466.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 18971897..18972413 34..551 98   Plus