FMO03472.5prime Sequence
390 bp (390 high quality bases) assembled on 2008-07-21
> FMO03472.5prime
TCGTATAGCATACATTAAACGAAGTTATCAGTCGACATGAAGATCACCGT
GGTACTCGTACTTCTCGCCACCTTCCTCGGCTGTGTGATGATCCACGAGT
CGGAGGCGTCCACAACCACCACGTCCACCTCCGCCTCGGCCACTACCACT
ACTTCCGCTTCGGCGACCACCACTACTTCCGCTTCGGCCACCACCACCAC
TTCCGCTTCGGCCACCACAACAACAGCCTCACCTTCCTCGAGCTCAAAAA
AGAAGACTGTCACTCACTATAAGCGAAAGGTCAAGAGGCCAAAGAAGGTC
AGGAAAATCACAAGGAGAAGGGGTCTCAGGAGCCGCAATGGTCGCAGCAG
TAGAAACCGCAGATCGGAAGAAGCAAGCTTTCTAGACCAT
FMO03472.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ng2-RA | 546 | CG14266-RA | 37..373 | 36..372 | 1685 | 100 | Plus |
| ng1-RA | 523 | CG10781-RA | 38..349 | 36..347 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3240199..3240535 | 372..36 | 1685 | 100 | Minus |
| X | 23542271 | X | 3242449..3242760 | 36..347 | 1560 | 100 | Plus |
| X | 23542271 | X | 3240353..3240417 | 194..130 | 250 | 92.3 | Minus |
| X | 23542271 | X | 3240377..3240441 | 218..154 | 250 | 92.3 | Minus |
| X | 23542271 | X | 3242543..3242607 | 154..218 | 250 | 92.3 | Plus |
| X | 23542271 | X | 3242567..3242631 | 130..194 | 250 | 92.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:26:55 has no hits.
FMO03472.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:47 Download gff for
FMO03472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ng2-RA | 33..377 | 28..377 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:25:58 Download gff for
FMO03472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ng2-RA | 33..377 | 28..377 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:46 Download gff for
FMO03472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ng2-RA | 33..377 | 28..377 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:46 Download gff for
FMO03472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3240195..3240539 | 28..377 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:47 Download gff for
FMO03472.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3134228..3134572 | 28..377 | 98 | | Minus |
