FMO03475.5prime Sequence
356 bp (356 high quality bases) assembled on 2008-07-21
> FMO03475.5prime
CGTATAGCATACATTTAACGAAGTTATCAGTCGACATGATCGACTTAGAG
GATCTGCCTCGGCTGCAATCCTTGTCCCCGGCGAAGGACATCGAATATAC
CTACCACCAGACCCAATTGCAGCTGAATCCGAAGAAGAAGGTCACCGTCC
GGGTGCCCATTGGACCACCCTCGAAGTTGAGTAAGCTGATTAAGCCCACG
GTGGCTTCCACGCCCGCTGTACTGGCCAAGCCAACGCCATCCATCACCCA
ATCGACGACGCCAGGTAACGCCAAGACCAACATTTGGAAAGGTGGCTTCC
ATTTTACCAATCTGGTAAGTATTGAAAGGCTTCGGTGTGCAAGCTTTCTA
GACCAT
FMO03475.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cnc-RN | 4746 | CG43286-RN | 313..592 | 36..315 | 1400 | 100 | Plus |
| cnc-RM | 4737 | CG43286-RM | 304..583 | 36..315 | 1400 | 100 | Plus |
| cnc-RI | 4750 | CG43286-RI | 317..596 | 36..315 | 1400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23222773..23223075 | 338..36 | 1515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:43:21 has no hits.
FMO03475.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:59 Download gff for
FMO03475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cnc-RI | 312..603 | 28..325 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:27:52 Download gff for
FMO03475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13826-RA | 309..621 | 28..346 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:49 Download gff for
FMO03475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cnc-RI | 312..603 | 28..325 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:49 Download gff for
FMO03475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23222768..23223080 | 23..346 | 95 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:59 Download gff for
FMO03475.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19048490..19048802 | 23..346 | 95 | <- | Minus |
