FMO03480.5prime Sequence
755 bp (755 high quality bases) assembled on 2008-07-21
> FMO03480.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCACAAGGTG
ATCCGGCAAATGTCCCAGCTGCGCCTGCAGGCGCCACAGGGAGCAGCGCT
CCTCCGATCGGCGGATAGCAGCTCAATATCACCAGCCATATCACCAGTTT
CACCACCTGCCCTCCAGTCGAAATCCCTGCACACGGCCGCTTCCGCCGGA
ATGCTGTGCGCCAAGTGGAACAAGTACAACTACGGACCCCGCAAATGGCT
GGAGTACAACAAGACCGTGCATCCGCCGCAGGAAACGGACGAGGAGCCCA
GAAATGCTTATGTCTGCCACATGCGCAGCAACATCAAATACAGTCCGGAC
AAGATGTGGTACATCGCTGCCTTTGTTCGCGGAATGTCCGTCGACGAGGC
GCTGAAGCAGCTGAACTTTGTGCTCAAAAAGGGGGCCACCGATGTGAAGG
AGACCATACTGGAGGCCCAGCAAATAGCCGTGGAGCGGCATAACGTGGAG
TACAAGAGCAATCTGTGGATAGCCGAATCCTTCGTGGGCAAGGGACGCGT
CTTCAAGGGCGTGAGGCGGCATGCTCGCGGTCGCTTCGGCAAAGTGGAGT
ACAAGCACTGCCACTACTTCGTGCGCCTGGAGGAGGGCGAGCCGCCGCAG
CACTACTACCAGGAGCCGCAGACGCCGGAGCAGCAGTACGAGAGCTGGAT
GGAGCAGATGCGAAGCCGGAAGATCATCAACTCGCTGGCAAGCTTTCTAG
ACCAT
FMO03480.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL22-RA | 973 | CG4742-RA | 143..841 | 39..737 | 3495 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16784075..16784344 | 39..308 | 1350 | 100 | Plus |
| X | 23542271 | X | 16784744..16784960 | 521..737 | 1085 | 100 | Plus |
| X | 23542271 | X | 16784418..16784631 | 309..522 | 1070 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:28:34 has no hits.
FMO03480.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:00 Download gff for
FMO03480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL22-RA | 143..845 | 39..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:20:37 Download gff for
FMO03480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL22-RA | 122..824 | 39..743 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:55 Download gff for
FMO03480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL22-RA | 143..845 | 39..743 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:55 Download gff for
FMO03480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16784075..16784344 | 39..308 | 100 | -> | Plus |
| X | 16784418..16784631 | 309..522 | 100 | -> | Plus |
| X | 16784746..16784964 | 523..743 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:00 Download gff for
FMO03480.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16678108..16678377 | 39..308 | 100 | -> | Plus |
| arm_X | 16678451..16678664 | 309..522 | 100 | -> | Plus |
| arm_X | 16678779..16678997 | 523..743 | 98 | | Plus |
