FMO03481.5prime Sequence
477 bp (477 high quality bases) assembled on 2008-07-21
> FMO03481.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTGACAAGGGC
GTGGGAGTGGGAATGGTTGCCAGCGATGTTCGGGATGTTTCCGATGCGGC
TGGTGTGGCTGGTGGTGCTGCTCTGTTTGCTACCTGGGCAGGTGCTGCTC
GGCAACGCCGCCTCGGTCACCTGGGGTCATGTCAACAAATACGCCAGCGT
GCTGCACACCGAAGATGTTTACCTGACGCCGGGTAGCCCCGGCCGAGATG
TGGCCTACGGCTTGCAGAAAGCCAGCGATAACTACCGGATTACGGGTGTG
CATGTCGAAGATCTAGGCGCCGATGAAGCGGAGGCGGTGCTCACGTCTGG
CGGCATTGGCCAGCAGTTTGTGGTCCTCCGCTGCCGGCGACTTCGGGACT
CCGAGGGGCAGCCGGAGCGAGCGGCTCATCTCGAGGTGTCCATCTATGGA
GTGGACCTGGCAAGCTTTCTAGACCAT
FMO03481.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30411-RA | 1237 | CG30411-RA | 124..552 | 31..459 | 2130 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23416062..23416298 | 31..267 | 1170 | 99.6 | Plus |
| 2R | 25286936 | 2R | 23416358..23416553 | 264..459 | 980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:56:48 has no hits.
FMO03481.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:10:08 Download gff for
FMO03481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30411-RA | 116..566 | 23..475 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:32:02 Download gff for
FMO03481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30411-RA | 110..560 | 23..475 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:45:05 Download gff for
FMO03481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30411-RA | 116..566 | 23..475 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:45:05 Download gff for
FMO03481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23416058..23416298 | 29..267 | 98 | -> | Plus |
| 2R | 23416362..23416567 | 268..475 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:10:08 Download gff for
FMO03481.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19303581..19303821 | 29..267 | 98 | -> | Plus |
| arm_2R | 19303885..19304090 | 268..475 | 97 | | Plus |
