FMO03483.5prime Sequence
436 bp (436 high quality bases) assembled on 2008-07-21
> FMO03483.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGCACATTTG
TTTGCCTTGCCCTGGCGACCATTCTCCTGGTCGCCGGCTCATCAGCAGCC
ACATATGATCCTGTGGCGGCGCAACTTCTGGATGTGGATGCAGGTGTCCA
GGCTCCGGTGGCAGCACGCCAAGCACGTCAGTTTGGCGGCGGCTTTGGCG
GTCCGGGAGGCGGTTTCGGAGGTCCAGGCGGCGGATTCGGAGGTCAAGGC
GGCGGATTCGGAGGTCCAGGCGGTGGATTCGGAGGTCAAGGCGGCGGATT
CAGAGGTCAAGGCGGCTTCGGAGGCGGTGGCTTTGGTGGACGTCCAGGTG
GCGGCTTTGGCGGACCGGGAGGCGGCTTCGGAGGACCAGGCGGTGGCTTC
GGTGGCGGATTTGGAGGCGCAAGCTTTCTAGACCAT
FMO03483.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9757-RB | 851 | CG9757-RB | 57..437 | 38..418 | 1875 | 99.5 | Plus |
CG9757-RA | 568 | CG9757-RA | 57..437 | 38..418 | 1875 | 99.5 | Plus |
CG9757-RB | 851 | CG9757-RB | 246..334 | 185..273 | 310 | 89.9 | Plus |
CG9757-RA | 568 | CG9757-RA | 246..334 | 185..273 | 310 | 89.9 | Plus |
CG9757-RB | 851 | CG9757-RB | 204..292 | 227..315 | 295 | 88.8 | Plus |
CG9757-RA | 568 | CG9757-RA | 204..292 | 227..315 | 295 | 88.8 | Plus |
CG9757-RB | 851 | CG9757-RB | 267..335 | 185..253 | 225 | 88.4 | Plus |
CG9757-RA | 568 | CG9757-RA | 267..335 | 185..253 | 225 | 88.4 | Plus |
CG9757-RB | 851 | CG9757-RB | 204..272 | 248..316 | 210 | 87 | Plus |
CG9757-RA | 568 | CG9757-RA | 204..272 | 248..316 | 210 | 87 | Plus |
CG9757-RB | 851 | CG9757-RB | 369..421 | 188..240 | 205 | 92.5 | Plus |
CG9757-RA | 568 | CG9757-RA | 369..421 | 188..240 | 205 | 92.5 | Plus |
CG9757-RB | 851 | CG9757-RB | 207..259 | 350..402 | 190 | 90.6 | Plus |
CG9757-RA | 568 | CG9757-RA | 207..259 | 350..402 | 190 | 90.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13611997..13612377 | 418..38 | 1875 | 99.5 | Minus |
3R | 32079331 | 3R | 13612100..13612188 | 273..185 | 310 | 89.9 | Minus |
3R | 32079331 | 3R | 13612142..13612230 | 315..227 | 295 | 88.8 | Minus |
3R | 32079331 | 3R | 13612099..13612167 | 253..185 | 225 | 88.4 | Minus |
3R | 32079331 | 3R | 13612162..13612230 | 316..248 | 210 | 87 | Minus |
3R | 32079331 | 3R | 13612013..13612065 | 240..188 | 205 | 92.5 | Minus |
3R | 32079331 | 3R | 13612175..13612227 | 402..350 | 190 | 90.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:37:44 has no hits.
FMO03483.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:39 Download gff for
FMO03483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9757-RA | 48..437 | 29..418 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:14:47 Download gff for
FMO03483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9757-RA | 44..433 | 29..418 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:51 Download gff for
FMO03483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9757-RA | 48..437 | 29..418 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:51 Download gff for
FMO03483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13611997..13612386 | 29..418 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:39 Download gff for
FMO03483.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9437719..9438108 | 29..418 | 98 | | Minus |