FMO03488.5prime Sequence
501 bp (501 high quality bases) assembled on 2008-07-21
> FMO03488.5prime
AGCATACATTATACGAAGTTATCAGTCGACATGCTCAAGTATCTGATCGT
AGCTCTGGCCCTCTGTGCTGTGGCCCATGCCGATGACTGGACGCCCAAGA
CTGGTGAGGAGATCAGGAAAATCCGCGTTGATTGCCTCAAGGAGAATCCG
CTGAGCAACGACCAGATCTCCCAGCTGAAGAACCTGATCTTCCCCAATGA
GCCCGACGTGCGCCAGTACCTGACCTGCTCGGCCATCAAGCTGGGCATCT
TCTGCGACCAACAGGGCTACCACGCCGACCGCCTGGCCAAGCAGTTCAAG
ATGGACCTGTCCGAGGAGGAGGCCCTTCAGATCGCCCAGAGCTGCGTGGA
CGACAACGCGCAGAAGAATCCCACGGATGTGTGGGCCTTTCGCGGACACC
AGTGCATGATGGCCAGTAAGATCGGCGACAAGGTCAGGGCCTTCGTGAAG
GCCAAGGCGGAGGAGGCCAAAAAGAAGGCCGCCGCAAGCTTTCTAGACCA
T
FMO03488.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp99c-RA | 580 | CG7584-RA | 62..514 | 31..483 | 2265 | 100 | Plus |
| Obp99c-RB | 566 | CG7584-RB | 88..500 | 71..483 | 2065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29685802..29686213 | 483..72 | 2060 | 100 | Minus |
| 3R | 32079331 | 3R | 29686681..29686723 | 73..31 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:31:48 has no hits.
FMO03488.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:48 Download gff for
FMO03488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99c-RA | 53..514 | 20..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:23:23 Download gff for
FMO03488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99c-RA | 51..512 | 20..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:33 Download gff for
FMO03488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99c-RA | 53..514 | 20..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:33 Download gff for
FMO03488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29685802..29686212 | 73..483 | 100 | <- | Minus |
| 3R | 29686682..29686732 | 20..72 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:48 Download gff for
FMO03488.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25511524..25511934 | 73..483 | 100 | <- | Minus |
| arm_3R | 25512404..25512454 | 20..72 | 92 | | Minus |
