FMO03489.5prime Sequence
724 bp (724 high quality bases) assembled on 2008-07-21
> FMO03489.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGTCGTCAGATC
GAAAGCTCATTGTAGTCTCCGGATTTGGTCCATTTCTCGGTCACGAAGCG
GTCAACGCCAGCTGGGAAGCTGTGAAACTGCTGCCGGAAATCCTAACTCA
CGATGGCATAGAATATGATCTGGAAAAGCGGTTGGTTTCGGTGGAATACG
GGGCTGTGGACGAGGCGGTGGCGGAGATTTGGAAACGCCAGCCATATCTT
GTTATCCATGTCGGTGTTTCGGGCGTTGCCAAGTGTGTATACATCGAGAA
GCTGGCGTACAATCACAAGTTCCGCCGAGCTGATAATTGTGATAAAAAAC
TGGCCAACGGCACTTGCGAACTACCCAACAATGGACATGCAAATGTCTTG
AAGACCGAATTAGATGTGGATAAGATTGTGGCGGTTGTAAATGAGAATTG
CGCCGATTGTGTGGGACCCACACAACAGCCGACACATAATGATAATCTCA
AATCCCTGAGCGCCACAAAGGCATCCAAAAATGTGGGTGACTTTCTCTGC
GGCTATATCTATCTGAAATCGCTCGATATGGACAGAAAACGAAGCCTGTT
TGTCCATGTACCTCCTGTAGATAGGCCATTTAGTAGTGTTAAGACTTCGG
AAATACTTTTTAGCATAGTCGAACAATGCATTCAACAGGTGGTCGCTTTT
GACTCCGCAAGCTTTCTAGACCAT
FMO03489.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32147-RA | 911 | CG32147-RA | 51..722 | 35..706 | 3360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15143252..15143710 | 706..248 | 2295 | 100 | Minus |
| 3L | 28110227 | 3L | 15143797..15144009 | 247..35 | 1065 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:43 has no hits.
FMO03489.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:49:46 Download gff for
FMO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32147-RA | 51..728 | 35..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:49 Download gff for
FMO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32147-RA | 17..694 | 35..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:37 Download gff for
FMO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32147-RA | 51..728 | 35..714 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:37 Download gff for
FMO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15143246..15143710 | 248..714 | 99 | <- | Minus |
| 3L | 15143797..15144009 | 35..247 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:49:46 Download gff for
FMO03489.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15136346..15136810 | 248..714 | 99 | <- | Minus |
| arm_3L | 15136897..15137109 | 35..247 | 100 | | Minus |
