FMO03490.5prime Sequence
809 bp (809 high quality bases) assembled on 2008-07-21
> FMO03490.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCAAAATACTCG
CTACTACTAATGCTGCTGCTAATCGCTGCGGTTGCGCAGGAACTTACTGT
AACGGCTGCGCAAGAATTGCCCGAAGGCTTTCCCAAGTGCAAACGGGACG
CGAACTTCGACAAATGCCTGGTGGATGCCGTCAATGTGGCGATACAGCAG
CTGAAGGCGGGCAATAGGGAATTTGGCATCCCGCCCCTCGAACCGCTGAC
CGTAAAGAAACTCGTTATAGACGCCGGCAATGCGCCAATAAATCTGCGCC
AGGCCTTGAAGAATGTGAAGGTGCACGACATGATCTCCACCAGCAAGATC
CAGCGGTACAGAACCGATCTGGATAAGCACTTGATTATCTGTGATAGCCG
AACGGATCGCATAGAGATGATTGGCGACTACAAGATGTCCGGCCGCATCC
TTCTGCTGCCCATCACGGGACATGGAAAGGCCAATGTCACGCTGATCAAC
ACCAAGATCGAGCATCGCCTGATCGGCGAACCCTTTGAGAAGGATGGCGT
CAAGTACATGCGACTAAAGGACTACCGGGTGTCCTTCGATCCCGAGAGGG
TGTACATGAACTTCGAGAATCTATTCAACGACAAAACTCTGTCGGATGGT
ATGAATCGATTCCTTAACGAAAACTGGGAGACGGTGTTCAACGAACTAAA
GGTGGGATATGCCAAGAGTTTCGGCATCATCTTCAGGGAGCTGTCCAACA
AACTGTTCGAGAAAGTGCCCTTCGATAATATATTCTTAAGTGCAAGCTTT
CTAGACCAT
FMO03490.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:30:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13618-RA | 1021 | CG13618-RA | 180..935 | 36..791 | 3750 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:30:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24527015..24527447 | 359..791 | 2135 | 99.5 | Plus |
3R | 32079331 | 3R | 24526750..24526901 | 210..361 | 760 | 100 | Plus |
3R | 32079331 | 3R | 24526599..24526689 | 121..211 | 455 | 100 | Plus |
3R | 32079331 | 3R | 24524973..24525057 | 36..120 | 425 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:30:06 has no hits.
FMO03490.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:38 Download gff for
FMO03490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13618-RA | 180..943 | 36..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:16 Download gff for
FMO03490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13618-RA | 174..937 | 36..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:22 Download gff for
FMO03490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13618-RA | 180..943 | 36..802 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:22 Download gff for
FMO03490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24527018..24527455 | 362..802 | 98 | | Plus |
3R | 24524968..24525057 | 33..120 | 96 | -> | Plus |
3R | 24526599..24526688 | 121..210 | 100 | -> | Plus |
3R | 24526751..24526901 | 211..361 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:38 Download gff for
FMO03490.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20350690..20350779 | 33..120 | 96 | -> | Plus |
arm_3R | 20352321..20352410 | 121..210 | 100 | -> | Plus |
arm_3R | 20352473..20352623 | 211..361 | 100 | -> | Plus |
arm_3R | 20352740..20353177 | 362..802 | 98 | | Plus |