FMO03491.5prime Sequence
1209 bp (1056 high quality bases) assembled on 2008-07-21
> FMO03491.5prime
CGTATAGCATACATTAAACGAAGTTATCAGTCGACATGAGCAATATTTAC
ATCCAAGAACCACCCACGTCGGGAAAGGTGCTCCTTAAGACCACTGTGGG
CGACATAGACATCGAGTTGTGGGCACGGGAGTGTCCGAAGGCGTGCCGCA
ACTTTGTGCAACTCTGCCTAGAGGGCTACTACAAGAACACCGAATTCCAC
CGGCTGGTCAAGGGCTTTATTGTCCAGGGAGGCGATCCGAATGGCGACGG
CACCGGCGGCGAGTCCATATACGGACAGCCCTTCAAGGATGAGTTCCACT
CCCGACTCCGGTACACGCGTCGTGGCCTCGTCGGCATGGCAAATTCTGGA
AAGGATGACAATGGCTCACAGTTCTTCTTCACATTTGCTCCGACACCGGA
GCTGCAGAATAAGAACACGCTTTTTGGAAAGATCACCGGCGATACCATCT
ACAACATGCTCAAGCTGGAAGATGGCATTGTTGACCACCAGGAAAGACCG
ATGCACGCACATCGCATCGTTTCTACGGAAGTCCTCTCGAACCCATTCGA
TGATATCGTTCCTCGTATTCTCTCCCAACCTTCCACGAAGAGCAAAAAGA
CTAAGAAGGAGCGACAAGGAGTCAAAAACTTCGGACTGCTTTCTTTTGGC
GAAGAAGCCGAAGGTGACGAGGAGGAGACCAACGTCTATGTTAAACAGAA
CGCCGGTAAGGCGAAATCCCTGCACGACGTCACAGATGATCCAAAACTCA
GCAAGGAGCCCATTCGTGTACCCAAAGTAGAAAAAGCCGACATCGAGGAG
CACTTGTCCGACGATTGCCCTGAGGACAGTGTCAAGGATAAACCGTCCAC
TGCTAGTTCGGATCTCATCAAAATGAAACTGTCTAAGAGATCAAAGAGTG
GAGCAGACAAAAAAGTTCAGCCAGTGGAGAAAGTCTGATTCTGAGATGAC
GAGGATGTTTTGTTACACGGGAGGAGAACAAAGTCGAAAGTCTCGGAGAA
ATCCAGATCCGTGAAGAAATCGCTTCTCTGAAAAGCAGTATTCAATGGAT
AAGCAGAGCAAGAACACTAGGTTATGAAAAGAAGAAGGCAGCTAGTCATG
ATCAGGGTCAGCGAAACCATATTTACGATTTAAAGTCTCTCAGGCGAGAA
GTACCGTCAGTAGCTTCACGAGACGTTCAGAGGCATTTCCGTGAGCCCAT
CTCTCTGGC
FMO03491.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:42:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10907-RA | 1610 | CG10907-RA | 74..1110 | 36..1061 | 4895 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:42:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11793587..11794176 | 36..625 | 2950 | 100 | Plus |
| 3L | 28110227 | 3L | 11794354..11794722 | 626..989 | 1630 | 98.6 | Plus |
| 3L | 28110227 | 3L | 11794802..11794859 | 1005..1061 | 195 | 93.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:42:22 has no hits.
FMO03491.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:41 Download gff for
FMO03491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10907-RA | 74..1124 | 36..1074 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:23:24 Download gff for
FMO03491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10907-RA | 44..1094 | 36..1074 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:17 Download gff for
FMO03491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10907-RA | 74..1124 | 36..1074 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:17 Download gff for
FMO03491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11793587..11794176 | 36..625 | 100 | -> | Plus |
| 3L | 11794354..11794737 | 626..1000 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:41 Download gff for
FMO03491.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11786687..11787276 | 36..625 | 100 | -> | Plus |
| arm_3L | 11787454..11787837 | 626..1000 | 97 | -> | Plus |
