FMO03495.5prime Sequence
480 bp (480 high quality bases) assembled on 2008-07-21
> FMO03495.5prime
AGCATACATTAAACGAAGTTATCAGTCGACATGTACAAATTCGTGTTGAT
CGCCAGCCTGCTGGTCGCCCTCTGCATGGCAGCTCCTCCCCGCCAGGAAT
CCGAAGCCGAAAGGATAGAGAGGGAGGAGTACGAGAAATATCAGAATGAA
AACGCCCAGTACTCGTTCAATTCGAGTGTGGATGATAAGATCAACGATGG
ACAAATCTCACGTAATGAGGAGCGCGAAGGAGGCACTGTTCGTGGTTCCT
ACAGCTACTTCGATGGTTTCGTGAAGCGCCGTGTTGAGTACATCGCCGAT
AAGGACGGCTACAGGGTGCTCAAGGACGAGATCGAGGATGTCGGCAATGG
TCCTTCGTTCAATCCCGATGGCATAGCCAACGTGGAGGGCTCTATGATCG
GCAAATACTCCATCAAACTGGATAAGGCCGACGATGACAAGCACTACAAG
GACATTCATGCCGCAAGCTTTCTAGACCAT
FMO03495.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr51A-RA | 651 | CG10112-RA | 84..515 | 31..462 | 2160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14512695..14513066 | 462..91 | 1860 | 100 | Minus |
| 2R | 25286936 | 2R | 14515069..14515128 | 90..31 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:32:58 has no hits.
FMO03495.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:36 Download gff for
FMO03495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr51A-RA | 76..515 | 23..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:31:12 Download gff for
FMO03495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr51A-RA | 73..512 | 23..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:11 Download gff for
FMO03495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr51A-RA | 76..515 | 23..462 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:11 Download gff for
FMO03495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14512695..14513066 | 91..462 | 100 | <- | Minus |
| 2R | 14515069..14515130 | 29..90 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:36 Download gff for
FMO03495.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10400200..10400571 | 91..462 | 100 | <- | Minus |
| arm_2R | 10402574..10402635 | 29..90 | 98 | <- | Minus |
