FMO03501.5prime Sequence
716 bp (260 high quality bases) assembled on 2008-07-14
> FMO03501.5prime
GTATAGCATACATTATACGAAGTTATCAATCCACATGGCTTTAAATGGAT
TTTTAGAGTTCTGCCTCAAGGGCAAGACCTTTAGGCCAAAAAAGCCATTT
GCCTCCGGAACCATTAGGTATTCCTTACATAAGCAAGCCCAGGCCAGTTT
GCAATCCGGGATTAATCTGCGGCAAGTGGTGGGTTTGCCGGAAGGGGAGA
ATCTCATCGAGTGGCTATCTGTGCCCGTTGTGGACTTCTTCAATCGCGTA
AACTTGATCTACGGCACCGTTTCCGAGTTTTGCAACTAAACTGCTTGTCA
CACGATGGCTGGCGGTTCCAGATATGAGTACTTATGGGCCGATGGAGATC
TATACCAAAAGACAACCGCCCTTTCGGCCCAAAAGTACATTGAGCATTTA
ATGGACTGGATTGAGACACAAATTAACAACGAAGCTGTTTTTCCAGTGTC
CACGGATGTTCCATTTCCCAAGAACTTCATAGCAATAAGTCATAGAATTT
TAGCCCGGCTTTTTCGAGTTTTCGTCCACGGCTATATTCACCATTTCAAT
AGGATTGTGAGAATTGGAGCGGAAGCTCACGTGAATGCCTGCTACAAACA
TTTTTACTACTTTGTGCAAGAATTTGACATGATTTCGGCCAAGGTATTGG
AACCCCTACAAGAAATGACATCTCCAATTTGCAAGGATAAGGATGCAAGC
TTTCTAGAGCATTCTG
FMO03501.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mob3-RA | 912 | CG4946-RA | 185..844 | 35..694 | 2835 | 95.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10265619..10265768 | 75..224 | 675 | 96.7 | Plus |
| 2L | 23513712 | 2L | 10266379..10266502 | 571..694 | 590 | 98.4 | Plus |
| 2L | 23513712 | 2L | 10265826..10265950 | 227..351 | 520 | 94.4 | Plus |
| 2L | 23513712 | 2L | 10266007..10266110 | 352..455 | 475 | 97.1 | Plus |
| 2L | 23513712 | 2L | 10266197..10266314 | 455..572 | 455 | 92.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:16 has no hits.
FMO03501.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:34 Download gff for
FMO03501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4946-RA | 178..848 | 29..699 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:15:25 Download gff for
FMO03501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mob3-RA | 180..850 | 29..699 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:21 Download gff for
FMO03501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mob3-RA | 180..850 | 29..699 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:21 Download gff for
FMO03501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10265827..10265950 | 228..351 | 94 | -> | Plus |
| 2L | 10266007..10266110 | 352..455 | 97 | -> | Plus |
| 2L | 10266198..10266313 | 456..571 | 92 | -> | Plus |
| 2L | 10266380..10266508 | 572..699 | 96 | | Plus |
| 2L | 10265621..10265771 | 77..227 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:25 Download gff for
FMO03501.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10266007..10266110 | 352..455 | 97 | -> | Plus |
| arm_2L | 10266198..10266313 | 456..571 | 92 | -> | Plus |
| arm_2L | 10266380..10266508 | 572..699 | 96 | | Plus |
| arm_2L | 10265621..10265771 | 77..227 | 96 | -> | Plus |
| arm_2L | 10265827..10265950 | 228..351 | 94 | -> | Plus |
