Clone FMO03502 Report

Search the DGRC for FMO03502

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:35
Well:2
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15168-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03502.5prime Sequence

379 bp (379 high quality bases) assembled on 2008-07-14

> FMO03502.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGGCAGTAAACTGT
TTAACAAACTCTTGCTAATTGCCGGATTTGCCAGCCTGGCACATGCTGCT
TTTTCTGCTGCCCATCATCGCACCTATTTGAGGCTGACGGAGCAGGAATG
GAATAGCCTTCCATTGGACATTATCCTGCAGACCGTCATCAGTTTGGTGA
TTGTGATTTACAACATCATCGAGATCGTTGGCAACTTCAAGGAAATTCGC
GCCACCGTGGACATGCAACAGAAAACTTGGGACACCTTGGGCAACTTCCC
CTCGTTCTATTCCTTCAATCACCGTGGTCGTGCCTTAAATCCTGGATATA
CGCCCCCGGAAGCAAGCTTTCTAGACCAT

FMO03502.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:14:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG15168-RA 492 CG15168-RA 83..409 35..361 1635 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:14:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18988057..18988248 170..361 960 100 Plus
2L 23513712 2L 18987789..18987870 35..116 410 100 Plus
2L 23513712 2L 18987936..18987988 117..169 265 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:14:41 has no hits.

FMO03502.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:17:25 Download gff for FMO03502.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15168-RA 54..393 26..366 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:32 Download gff for FMO03502.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15168-RA 74..413 26..366 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:59 Download gff for FMO03502.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15168-RA 74..413 26..366 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:59 Download gff for FMO03502.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 18987780..18987870 26..116 95 -> Plus
2L 18987936..18987988 117..169 100 -> Plus
2L 18988057..18988252 170..366 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:32 Download gff for FMO03502.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18987780..18987870 26..116 95 -> Plus
arm_2L 18987936..18987988 117..169 100 -> Plus
arm_2L 18988057..18988252 170..366 98   Plus