FMO03507.5prime Sequence
725 bp (725 high quality bases) assembled on 2008-07-14
> FMO03507.5prime
ATAGCATACATTATACGAAGTTATCAGTCGACATGAGCTCGCCAACGAGT
AAAAATGTCAGCGAAACGAACGGGAACAAGCCAAAGAAGTCGGCCAAAAC
GAGCTCGAATACGAAAGGCGGCTCCATGGACACTCGCGCCGAGTTGGCGG
ACCTCATCAAGAAGAAGGCCGAAACATCGGAACAACTGGCCAATCTGGAG
CGACAGATCTACGCCTTCGAGGGCTCCTACCTAGAGGACACGCAGTTGTG
CGGAAACATCATCCGAGGCTGGGAGCGCTATCTGACCTCCAACAAGGCCA
CCAACTCCAAGGCCGACAAGCGGAATCGCAAGTTCAAGGAGGCCGAGCGC
CTGTTCTCCAAGTCCAGCATCACCTCCATGGCTATATGCAATCCTGAGCG
CGCCAGCGAATCGGATTCCATCACAAATGAAGACTCCAGCGACAATCAGA
TCTCAATCAATCAGAACACCACAACGGCCCACGACGGAACCACGACAATC
AAGAGCACACCGAAAGACGAAAAGGATTCACCCTCGCATCGCAATGAGGG
CAGCGTAGTGAGCGGAATGGTGTCTGGATCTACGAACAGTGGAGGGAACA
AGGATCTCCTCGGCACACCCACTTCGAATACAAAGAGCAAACTATCCACG
AACTCCAGTGCGACAGCGAAGAAAAGCGGTCACATAAACAAGAAGATTCG
ACATCGAGCAAGCTTTCTAGACCAT
FMO03507.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eaf6-RA | 864 | CG12756-RA | 68..742 | 33..707 | 3375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5607806..5608020 | 393..179 | 1075 | 100 | Minus |
| 3L | 28110227 | 3L | 5607284..5607466 | 707..525 | 915 | 100 | Minus |
| 3L | 28110227 | 3L | 5608086..5608233 | 180..33 | 740 | 100 | Minus |
| 3L | 28110227 | 3L | 5607552..5607683 | 525..394 | 660 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:54:33 has no hits.
FMO03507.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:17:28 Download gff for
FMO03507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eaf6-RA | 8..690 | 33..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:40 Download gff for
FMO03507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eaf6-RA | 68..750 | 33..714 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:29:21 Download gff for
FMO03507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eaf6-RA | 68..750 | 33..714 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:29:21 Download gff for
FMO03507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5607552..5607683 | 394..525 | 100 | <- | Minus |
| 3L | 5607806..5608019 | 180..393 | 100 | <- | Minus |
| 3L | 5608087..5608233 | 33..179 | 100 | | Minus |
| 3L | 5607276..5607465 | 526..714 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:40 Download gff for
FMO03507.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5601187..5601333 | 33..179 | 100 | | Minus |
| arm_3L | 5600906..5601119 | 180..393 | 100 | <- | Minus |
| arm_3L | 5600376..5600565 | 526..714 | 97 | <- | Minus |
| arm_3L | 5600652..5600783 | 394..525 | 100 | <- | Minus |
