FMO03508.5prime Sequence
739 bp (736 high quality bases) assembled on 2008-07-14
> FMO03508.5prime
GTATAGCATAAAAAAAAAAAGTTATCAGTCGACATGGAGAAGCTAGCGTC
CCTCAAAACGTGTCTTAAACTGCTGCAGGTTATGCCCGGCGTGCAGCAGG
CGGCCCTTCTTCCTGGTGGTGGCCTGTGCGTGCTCGCTTCTCCTCTTCAG
AATCTGATCCAGATGCAGCAGGTGCGCCACCGACAAACCAAGCACTGGAA
GCCCGAGTTCAAGCGCCTTCGTAAGCTCAAGTTCGTAAAGATGGATCTGC
CCAATCTGCGCGAGAAACAGGAGGATATCACCAAGGAGGAGATGCGCAGC
CGGATGAAGGAGCGAGGTGTCTTGCCTCCCCGTCCCTGGATGGAGCGCCC
TTTCCACATAAGCTGCACGGGCGGCATCTTCGAGGCTTATGTCCCTCCTG
AAGGCGACGGCAAGAAGTCGATCATTTCAACATCGGGTGCCAAGCAGAAG
TTGGAGTTCCTGGAGAAGAAGTCCAAGAGCCTGATGGCCGTGCGCAAGAT
TCGTTCCTACGACGAAAACTTCAGCTCCGATGATTTCGGCGCCGAGGCCC
AGGATATTTACATCCAGGCGCACACTCACATGGCTGCCAAGGACAAGTAC
AAGATCCGCGAGTTCGTCAGCGAACGCTGTTATCCGGAGATGATGCACAA
CGTCAAGGACAAGACCATTCGCTGGAAGTTTCTACAGTCGCTGGAACCAC
CACGCGTTGTCCATGCCCCGCGTGACGGAGGTGATCACA
FMO03508.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL45-RA | 1268 | CG6949-RA | 79..782 | 34..738 | 3425 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22618679..22619340 | 76..738 | 3235 | 99.5 | Plus |
| 3R | 32079331 | 3R | 22618570..22618616 | 34..80 | 190 | 93.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:27:54 has no hits.
FMO03508.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:35 Download gff for
FMO03508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL45-RA | 88..791 | 34..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:30 Download gff for
FMO03508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL45-RA | 108..811 | 34..738 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:15 Download gff for
FMO03508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL45-RA | 79..782 | 34..738 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:15 Download gff for
FMO03508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22618682..22619340 | 79..738 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:30 Download gff for
FMO03508.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18444404..18445062 | 79..738 | 99 | | Plus |
