FMO03509.5prime Sequence
409 bp (253 high quality bases) assembled on 2008-07-14
> FMO03509.5prime
GCATAATTATACGAAGTTATCAATCCACATGAAAGCCTCCCTAGCTCTTG
TGTTCTGTGTTTGTGTCGGTCTTGCGGCAGCTGCTCCTGAAAAAACCTAC
ACCAACAAGGACGACCGTGTCACCGTGGATGAAGTTCTGGGCAACAACCA
ACTGTTGGGCAATTATCTCAAGTGCCTGATGGACAAGGGCCCATGCACAG
CAGAGGGTCGTGAACTTAAGCTCCTTTTACCCGACGCCCTTCATTCCGAC
TGCTCAAAGTGCACGGAAGTCCTTCGCACATACTCACAAAAGGTAATCAA
CTACCTTCGCGCCAACAAAGCCGGCGAATGGAAGCTCCTCCTGAACAAGT
ACGATCCCCAAGGCATCTACAGCGCAAAGCACGAGGGAGACCCAAGCTTT
CTAGACCAT
FMO03509.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Phk-3-RC | 718 | CG9358-RC | 257..616 | 29..388 | 1590 | 96.1 | Plus |
| Phk-3-RB | 635 | CG9358-RB | 174..533 | 29..388 | 1590 | 96.1 | Plus |
| Phk-3-RA | 546 | CG9358-RA | 85..444 | 29..388 | 1590 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24970945..24971304 | 388..29 | 1590 | 96.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:52:39 has no hits.
FMO03509.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:36 Download gff for
FMO03509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Phk-3-RA | 72..449 | 19..397 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:05 Download gff for
FMO03509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Phk-3-RA | 75..452 | 19..397 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:29 Download gff for
FMO03509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Phk-3-RA | 75..452 | 19..397 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:29 Download gff for
FMO03509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24970937..24971312 | 25..397 | 93 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:05 Download gff for
FMO03509.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20858460..20858835 | 25..397 | 93 | <- | Minus |
