FMO03517.5prime Sequence
774 bp (774 high quality bases) assembled on 2008-07-14
> FMO03517.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTTCAGATTTCTTGC
ACTGACCACCTTGGTGGCCCTGGCTTCCAGCCAGCACTATCACCAGGATC
CCAAAACGGCGGCCATCATCAGTGAGCAGCGTTATCTGTCCGGAGATGGA
AAGTTCGGAGCTGCCTATGAGCAGGAGGATGGCATCAACTTCAAGGAGGA
GACGGATGCGGATGGAACACGTCATGGCAGCTACAGCTATCTGGATCCCA
CGGGCCAGAGGCGTACTATTTCGTACACAGCTGGCAAAAATGGTTTCCAA
GCTTCTGGAGATCACTTGCCCCAGGCACCACCTGCTCCACCACAGCCCGT
GCCCACAGCGGGATATCAGCCACAGCAGCAGTACCAGCCGCAGCAGTACC
AGGCTCCCGCTCCCCAGCCGCAGGCCAGTTTCCGCAGCAATGACTACGGA
GATGATGGTTCCTACGATCCCCGCTACAACGATCCCTCTTTCGGACAGAA
CCAGCAGAGCTACCAGCAGCCCGCTGCCCAGCCGCAGTACCGTCCTGCTC
CCCAGCCCGCCTACAACCCACAGCCCGTGCAGCCGCAGCAGCAGTACCAG
CCTCAGTATCAGCAGCCCCAACCCCAGTATCAGCAGCCGCAACCCCAGCA
GGCGTACTACACCACCACCACCCCCAACCCACACCGCTTTTCGCCACCCG
GCAAACTGTCCCTGAACCGCACGCCCGATGGCTTCACCTACTCCTTCAAC
AAGGTAGCAAGCTTTCTAGACCAT
FMO03517.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr100A-RA | 1378 | CG12045-RA | 152..874 | 34..756 | 3615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30868212..30868680 | 288..756 | 2330 | 99.8 | Plus |
| 3R | 32079331 | 3R | 30867907..30868154 | 46..293 | 1240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:38:43 has no hits.
FMO03517.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:40 Download gff for
FMO03517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr100A-RA | 143..877 | 26..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:28 Download gff for
FMO03517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr100A-RA | 145..879 | 26..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:07 Download gff for
FMO03517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr100A-RA | 145..879 | 26..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:07 Download gff for
FMO03517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30867907..30868154 | 46..293 | 100 | -> | Plus |
| 3R | 30868218..30868685 | 294..762 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:28 Download gff for
FMO03517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26693629..26693876 | 46..293 | 100 | -> | Plus |
| arm_3R | 26693940..26694407 | 294..762 | 99 | | Plus |
