FMO03523.5prime Sequence
1036 bp (1036 high quality bases) assembled on 2008-07-14
> FMO03523.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCGCAAATA
TAGCCGCCGCTGCTGCAGCTGCCCAAGAAGTGGATCCCGTGCTGAAGAAG
GCCATCAAGTTGCTGCACTCGAGTAATCCCACCTCGGCGGCCGAACTGCG
TCTGCTTTTGGACGAGGCTTTGAAGGCGCGTTTTGGTCCGGAGAAAAGTT
TGACCAACAACATGACGCCACGGATGCTGGAGGATGAAGCGAACTTTTCC
GGACGTGCTGCCACGCCCCCGCAGCAGCCCATCAATGCGGACGAGATCAT
CAATTTGACCAACTCACCGGACAAGGAGCCCTCCGATTCGGTGGACACGA
TTGCGGATTCGGATGACGGTCTAAGCGCCGTGGGAATAGTTAACACCGGT
GACACCGGCGACTTTGGCGACCTCAATTGCTGCGTGTGCGGCGAGATGGT
TTTCACGGCCACCAATCGGCTGATTGAGTGCTCCAAGTGCGGTGCCATGT
ACCATCAGGAGTGCCACAAGCCGCCCATAACCAAGGAGGAGGCGGCCGAT
GACCAGGAGCAGAACTGGCAGTGCGACACGTGCTGCAACAAGCCAACGAG
CAGCGGGAGGACAACATCCTCTGCAGCGGCCGTAACGCCAACTGTCTTCA
TAGCCGACGAACCCATGCCGTTGACCAGCAAAGCCAAATCGTCGGTCGCG
TCGTCGCGCTCATCGAACTCTTCCAACTCCTCGTCACCCTTCTACCGGCC
CGAGCCCAGCAGTTCCACGAATGCCAGCAGCAGTAGCAGCAGCAAGCATG
GCCACAAGTCCTCCTCTTCGTCGTCGTCCAAATCGCACAAGGAAGAACGA
TCCTCTAAGTCCACGGCGGCGTCTTCTCTTAGCGCCATCGGCGGAATGGA
GAAGCACAACAGCAGTGGCACCTCATCGCGACGCAGCGGCTCCAGCACCA
AATCCAGCTCCAGAGCAGTTCCTCAAGCATCACGAAAGCGGCAGCAGCAG
CAGCGCAGATCCAAGCAGCCAGCTTTCTAGAACCAT
FMO03523.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IntS12-RA | 1184 | CG5491-RA | 95..1078 | 38..1018 | 4845 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26863470..26864453 | 38..1018 | 4770 | 99.7 | Plus |
Blast to na_te.dros performed 2014-11-28 18:52:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2328..2532 | 757..958 | 116 | 54.8 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 971..1001 | 765..795 | 110 | 83.9 | Plus |
FMO03523.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:39 Download gff for
FMO03523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5491-RA | 73..1062 | 38..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:45 Download gff for
FMO03523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS12-RA | 95..1084 | 38..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:04 Download gff for
FMO03523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IntS12-RA | 95..1084 | 38..1026 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:04 Download gff for
FMO03523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26863470..26864459 | 38..1026 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:45 Download gff for
FMO03523.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22689192..22690181 | 38..1026 | 99 | | Plus |
