FMO03526.5prime Sequence
513 bp (513 high quality bases) assembled on 2008-07-14
> FMO03526.5prime
TATAGCATACCTTATACGAAGTTATCAGTCGACATGTTCGCATCTGTGGA
ATTAAGCTCATATCGCGATCAGCACTTCAAGGGCTCGCGCTCCGAGCAAG
AGCGATCGCTCCGCGACTCGTGTACACTTTACGTGGGAAACTTGAGCTTC
TACACCACCGAGGAGCAGATCCACGAGCTCTTCTCCCGCTGCGGCGATGT
TCGTGTGATTGTGATGGGCCTGGACAAGTATAAGAAGACGCCCTGCGGCT
TCTGCTTCGTGGAGTACTATGTCCGATCGGAGGCGGAGGCGGCCATGAGA
TTTGTGAATGGCACTCGCTTGGACGACCGTCTGATTCGTGTGGACTGGGA
CGCCGGCTTCGTGGAGGGCAGGCAGTATGGACGCGGCAAAACCGGCGGAC
AGGTGCGAGATGAATACCGCACGGATTACGATGCCGGCCGCGGGGGTTAT
GGCAAACTGTTGTCACAGAAGATTGCACCCAACACGGACAATCGCGCAAG
CTTTCTAGACCAT
FMO03526.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cbp20-RA | 600 | CG12357-RA | 69..530 | 34..495 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:01:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18164830..18165049 | 80..299 | 1100 | 100 | Plus |
| 3R | 32079331 | 3R | 18165172..18165369 | 298..495 | 990 | 100 | Plus |
| 3R | 32079331 | 3R | 18164729..18164777 | 34..82 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:01:07 has no hits.
FMO03526.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:15:09 Download gff for
FMO03526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cbp20-RA | 67..533 | 34..503 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:16 Download gff for
FMO03526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cbp20-RA | 69..535 | 34..503 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:48 Download gff for
FMO03526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cbp20-RA | 69..535 | 34..503 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:48 Download gff for
FMO03526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18164729..18164776 | 34..81 | 100 | -> | Plus |
| 3R | 18164832..18165049 | 82..299 | 100 | -> | Plus |
| 3R | 18165174..18165374 | 300..503 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:16 Download gff for
FMO03526.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13990451..13990498 | 34..81 | 100 | -> | Plus |
| arm_3R | 13990554..13990771 | 82..299 | 100 | -> | Plus |
| arm_3R | 13990896..13991096 | 300..503 | 98 | | Plus |
