Clone FMO03531 Report

Search the DGRC for FMO03531

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:35
Well:31
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14193-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03531.5prime Sequence

591 bp (591 high quality bases) assembled on 2008-07-14

> FMO03531.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGGACAAAGA
AAACCGCCCCAACAACAAGAACACAGGTGGTTTCCCCGCGGAGGAGGAAA
AGCAGAAGGAGAACGATCAGCAGAAGGAGAACGATCAGCAGAAGGAGAAC
GATCAGCAGGAGGAAGTGCAGGAAGAGCCGACAAAGGATGAATCCAAGGA
GGCCGGTTCGACGCCGCCTCCAAAGCACATGGGAGTTCACAATTCGGCTC
GGGCAGAGCTGGCTCGGCTGCTCGTCGAGTTGTTGGTACAACAGGCAGAA
CTGGATGCAACCAACGGTGGCAGCGTGTCAGGGAATCTCGATGGCGGCAA
TTCCAATGAGTCCCAACCGTTGAACGTGCCGCCTACGGATGCGCTCCTGG
TCCGCGGCAAAGCAATTGAGAATGTTATGTACAGCTATATGCTTGGTGAC
ACGGTCTACTTCATTGTCACCTGGAAGGGATCCAAGTGGGGGGAAGCCGT
GCCTGTTCAGGAGATCAAACATGTGCACCCCAAGCTACTCATTGACTACA
TTAAGAGCCTGAAGCTACAGGACGCAAGCTTTCTAGACCAT

FMO03531.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:26
Subject Length Description Subject Range Query Range Score Percent Strand
HP1D3csd-RA 816 CG14193-RA 63..599 37..573 2670 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:24
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19190276..19190812 37..573 2670 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 20:45:25 has no hits.

FMO03531.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:00 Download gff for FMO03531.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14193-RA 63..603 37..577 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:31 Download gff for FMO03531.5prime
Subject Subject Range Query Range Percent Splice Strand
HP1D3csd-RA 63..603 37..577 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:13 Download gff for FMO03531.5prime
Subject Subject Range Query Range Percent Splice Strand
HP1D3csd-RA 63..603 37..577 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:13 Download gff for FMO03531.5prime
Subject Subject Range Query Range Percent Splice Strand
X 19190276..19190816 37..577 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:31 Download gff for FMO03531.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 19084309..19084849 37..577 99   Plus