FMO03535.5prime Sequence
1033 bp (1033 high quality bases) assembled on 2008-07-14
> FMO03535.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGAGCGGAAACTG
CACAGTGGAATGCACCATGCCACGCTGCGGCAGCTGCAGGAGTCGGGCTG
CGAGATAGCGCCGCACAATCTCATGTATCCGGTGTTCATCGTGAGCAACG
ACGACGATGTCCAGCCAATTGCCAGCATGCCAGGAATCTCGAGATTCGGA
CTGAATCGCCTGAAGGAGCACCTGGAACCGCTGGTGGCCAAGGGACTGTC
GTCGGTGCTGCTCTTTGGCGTTGTGGACCCGGACATGAAGGATGAGCAGG
CCTCCAATGCGGATTCAGCAAAGAATCCAGTCGTTCTCGCACTGCCGAAG
CTCCGGGAATGGTTTCCGGATCTGCTGATAGCCTGTGATGTGTGCATCTG
CCCGTACTCCTCGCACGGTCACTGCGGCCTGCTGGGCGAAACGGGTCTGG
AGAACGGACCCAGCATAAAGCGGATAGCCGAGATCGCCGTGGCTTATGCC
AAAGCTGGAGCACACATTGTGGCTCCATCGGACATGATGGACAACCGGGT
GAAGGCCATTAAGCAGGCCCTCATCGATGCCCAGATGAACAGTGTATCCC
TGCTGGCGTACTCCGCCAAGTTCACATCCAATTTCTATGGACCCTTCCGG
GAGGCAGCACAATCTGCACCGAAATTCGGTGACCGGAGGTGCTATCAACT
GCCCAGTGGCTCCAGAAGCTTAGCAATGAGAGCCATTCAACGTGATGTCG
CCGAGGGAGCCGACATGCTGATGGTGAAACCGGGAATGCCCTATCTGGAT
ATCCTACGATCCACAAAGGATTCCTATCCGTATCACACGCTGTACGTCTA
CCAGGTTTCCGGGGAGTTCGCTATGCTGTATCATGCCGCCAAGGCGGGAG
CCTTTGACCTCAGGATGCCGTGCTGGAGGCCATGAAGGGCTTTCGACGAG
CTGGTGCCGATTGCATCATCACCTACTACCCACCCTTTCTGCTGGACATT
ATCGGAAAGGTCAAGGCAAGCTTTCTAGACCAT
FMO03535.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pbgs-RB | 1894 | CG10335-RB | 71..1051 | 36..1015 | 4865 | 99.8 | Plus |
| Pbgs-RA | 1378 | CG10335-RA | 71..1051 | 36..1015 | 4865 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12270295..12271275 | 1015..36 | 4840 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:51:57 has no hits.
FMO03535.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:15:56 Download gff for
FMO03535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbgs-RA | 56..1039 | 36..1019 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:53 Download gff for
FMO03535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbgs-RA | 71..1054 | 36..1019 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:10 Download gff for
FMO03535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pbgs-RA | 71..1054 | 36..1019 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:10 Download gff for
FMO03535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12270292..12271278 | 33..1019 | 99 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:53 Download gff for
FMO03535.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12263392..12264378 | 33..1019 | 99 | -> | Minus |
