FMO03549.5prime Sequence
427 bp (427 high quality bases) assembled on 2008-07-14
> FMO03549.5prime
CTTCGTATAGCATACATTATACGAAGTTATCAATCCACATGCAGTGCGGT
CTGGAGCATATGAACGACTGTGAGCGGTCGCCGAACCGGACGAACCTCCG
GGTCAACTTCAACGAGAAGGGGGCGGAGGTGAAGGAGCGGCGGGAGAAGT
TCCTCACGGCCAAGTACGGTTCACACCAAATGAGCCTCATCCGCGAGCGG
CTGGCCGTGGAGATGTGGCTCTACTACCAGCTACAAAAGCTCTTCAATCC
ACCAAACGAGGCCATCGATGTGGACATCGACGAGATACTGGACATGGACA
CAGATGACATAGCTGATCTCATCTTATAAGATTACTGTCCGTCTGCAAAC
GCCCGCAATCAGACATATCCAAGTTCATTGGCGATCTGCTGGATCGCGCA
AAAACCCTGGCAAGCTTTCTAGACCAT
FMO03549.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:46:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17124-RC | 2989 | CG17124-RC | 1202..1573 | 39..409 | 1685 | 97 | Plus |
CG17124-RB | 2291 | CG17124-RB | 504..875 | 39..409 | 1685 | 97 | Plus |
CG17124-RA | 1251 | CG17124-RA | 504..875 | 39..409 | 1685 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10745782..10745997 | 254..39 | 975 | 96.8 | Minus |
2L | 23513712 | 2L | 10745491..10745571 | 409..329 | 390 | 98.8 | Minus |
2L | 23513712 | 2L | 10745635..10745722 | 328..242 | 300 | 92 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:45:59 has no hits.
FMO03549.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:17:47 Download gff for
FMO03549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17124-RB | 490..869 | 31..413 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:44 Download gff for
FMO03549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17124-RA | 499..878 | 31..413 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:37 Download gff for
FMO03549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17124-RA | 499..878 | 31..413 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:37 Download gff for
FMO03549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10745487..10745571 | 329..413 | 96 | <- | Minus |
2L | 10745635..10745709 | 255..328 | 96 | <- | Minus |
2L | 10745782..10746002 | 31..254 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:44 Download gff for
FMO03549.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10745782..10746002 | 31..254 | 95 | | Minus |
arm_2L | 10745487..10745571 | 329..413 | 96 | <- | Minus |
arm_2L | 10745635..10745709 | 255..328 | 96 | <- | Minus |