FMO03555.5prime Sequence
405 bp (405 high quality bases) assembled on 2008-07-14
> FMO03555.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCGCCTAAGAA
GGACGCGAAGTCTTCGGCCAAGCAGCCGCAAAAGACACAAAAGAAGAAGG
AGGGATCCGGCGGCGGCAAGGCCAAGAAGAAGAAGTGGTCCAAGGGAAAA
GTCAGGGACAAGCTGAACAACCAGGTGCTGTTCGACAAGGCCACCTACGA
GAAGCTGTACAAGGAAGTGCCCGCCTACAAGCTGATCACCCCATCGGTGG
TCTCCGAGCGTCTGAAGATCCGCGGCTCCCTGGCCAAGCGTGCTCTCATC
GAGCTGCGCGAGAAGGGTCTGATCAAGCAGGTCGTGCAGCATCATTCCCA
GGTCATCTACACACGTGCCACCAAGGGTGATGAGGCGGCAAGCTTTCTAG
ACCAT
FMO03555.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS25-RB | 515 | CG6684-RB | 27..377 | 37..387 | 1755 | 100 | Plus |
RpS25-RA | 850 | CG6684-RA | 27..377 | 37..387 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11215691..11215970 | 318..39 | 1400 | 100 | Minus |
3R | 32079331 | 3R | 11215554..11215625 | 387..316 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:41:22 has no hits.
FMO03555.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:15:15 Download gff for
FMO03555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS25-RA | 50..408 | 28..391 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:46 Download gff for
FMO03555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS25-RA | 22..380 | 28..391 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:24 Download gff for
FMO03555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS25-RA | 22..380 | 28..391 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:24 Download gff for
FMO03555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11215550..11215624 | 317..391 | 97 | <- | Minus |
3R | 11215693..11215976 | 30..316 | 98 | -> | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:46 Download gff for
FMO03555.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7041272..7041346 | 317..391 | 97 | <- | Minus |
arm_3R | 7041415..7041698 | 30..316 | 98 | -> | Minus |