Clone FMO03565 Report

Search the DGRC for FMO03565

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:35
Well:65
Vector:pMK33-CFH-BD
Associated Gene/Transcriptm2-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03565.5prime Sequence

708 bp (708 high quality bases) assembled on 2008-07-14

> FMO03565.5prime
TCGTATAGCATACATTTTACGAAGTTATCAGTCGACATGTATCTGGATAC
GAAAAACCTGACAGCCAGCAGCACTTCAGCACTGACAGCGGCCACAGCAT
CGAACTCAAAGTCAACACGGCGCATGCGTAACGTGTGGAAACCGCTGAGT
CGCCTACTGAAAGTGGGTGGCAAAGGTCGCACCGCACAGGCGACCTTGGC
CCATCCCAACAACGTGGATCTCAACAACACACAGCAGCAGCAACAGCAGC
AGCAGCAGGAGTTGCTCATTGAAGATGACACCAAGTCAACGCCAGAGGAG
TCTATCCACAAGTACGGTCTGGAGCTGAGGCAATTGCCCGAGGAGGAGCA
GGTGTCCCTCACCCAGCCGCCCAACACACCCACATTGATTAGCAGCGTGC
ATGTGGACAAGGTCAGCGCCCAGAGCTGCGGCAACTGCCAACACGGACGC
AACTGCCAGCATCGACATCACAGCAGCAGCAACATCAACAGTAGCAGCAG
CAGCAGCAATATGAACAGCAGCAGTGCAACACAGTTGCCCAGTAATCTCT
GGGATCTGCAGTTGCCCCTCCAATACATCAGCACGGACAATGGCACCTTC
TTCTGGGCCAACACCCAGGATCGGGTGGACGATGATCTTCTGCACGCCTT
GCTTTGCCAGAGCTTCAGTCAGCTGCCCGGAACGCTCTGCGCAAGCTTTC
TAGACCAT

FMO03565.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
E(spl)m2-BFM-RA 957 CG6104-RA 107..762 35..690 3265 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26016709..26017364 690..35 3265 99.8 Minus
Blast to na_te.dros performed on 2014-11-28 19:37:42 has no hits.

FMO03565.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:53 Download gff for FMO03565.5prime
Subject Subject Range Query Range Percent Splice Strand
m2-RA 102..767 29..698 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:25 Download gff for FMO03565.5prime
Subject Subject Range Query Range Percent Splice Strand
E(spl)m2-BFM-RA 102..767 29..698 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:59 Download gff for FMO03565.5prime
Subject Subject Range Query Range Percent Splice Strand
E(spl)m2-BFM-RA 102..767 29..698 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:59 Download gff for FMO03565.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26016704..26017369 29..698 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:25 Download gff for FMO03565.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21842426..21843091 29..698 98   Minus