FMO03565.5prime Sequence
708 bp (708 high quality bases) assembled on 2008-07-14
> FMO03565.5prime
TCGTATAGCATACATTTTACGAAGTTATCAGTCGACATGTATCTGGATAC
GAAAAACCTGACAGCCAGCAGCACTTCAGCACTGACAGCGGCCACAGCAT
CGAACTCAAAGTCAACACGGCGCATGCGTAACGTGTGGAAACCGCTGAGT
CGCCTACTGAAAGTGGGTGGCAAAGGTCGCACCGCACAGGCGACCTTGGC
CCATCCCAACAACGTGGATCTCAACAACACACAGCAGCAGCAACAGCAGC
AGCAGCAGGAGTTGCTCATTGAAGATGACACCAAGTCAACGCCAGAGGAG
TCTATCCACAAGTACGGTCTGGAGCTGAGGCAATTGCCCGAGGAGGAGCA
GGTGTCCCTCACCCAGCCGCCCAACACACCCACATTGATTAGCAGCGTGC
ATGTGGACAAGGTCAGCGCCCAGAGCTGCGGCAACTGCCAACACGGACGC
AACTGCCAGCATCGACATCACAGCAGCAGCAACATCAACAGTAGCAGCAG
CAGCAGCAATATGAACAGCAGCAGTGCAACACAGTTGCCCAGTAATCTCT
GGGATCTGCAGTTGCCCCTCCAATACATCAGCACGGACAATGGCACCTTC
TTCTGGGCCAACACCCAGGATCGGGTGGACGATGATCTTCTGCACGCCTT
GCTTTGCCAGAGCTTCAGTCAGCTGCCCGGAACGCTCTGCGCAAGCTTTC
TAGACCAT
FMO03565.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
E(spl)m2-BFM-RA | 957 | CG6104-RA | 107..762 | 35..690 | 3265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26016709..26017364 | 690..35 | 3265 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:37:42 has no hits.
FMO03565.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:53 Download gff for
FMO03565.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
m2-RA | 102..767 | 29..698 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:25 Download gff for
FMO03565.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m2-BFM-RA | 102..767 | 29..698 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:59 Download gff for
FMO03565.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
E(spl)m2-BFM-RA | 102..767 | 29..698 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:59 Download gff for
FMO03565.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26016704..26017369 | 29..698 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:25 Download gff for
FMO03565.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 21842426..21843091 | 29..698 | 98 | | Minus |