FMO03571.5prime Sequence
361 bp (361 high quality bases) assembled on 2008-07-14
> FMO03571.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGATTGATGGGCATC
TTGCGTACAAATTAACACCGGAATTACTCCTCGTGCACTGCAGGCCAAGT
TCGGCGAACTTCCAACGATTTTCGACTCCACCCCAAACCCAAAAAAAAAA
AGACATAACAAAAAAAGTAACGAAAAAGGAAGATGCGTTTTGGCCCATTT
CAAATGAAGCCGACTTTCAATTAGGCAAAAACTTGGCAGCAAACCAAAAA
CAAAAGCAAGCTAATGAGACGACGACTGAGTTTGGCCGGAGGTGCGATCG
TGACTTCGAATGCGACCAGTGTCAAAGGCGCAGCTGGATATTCGCAAGCT
TTCTAGACCAT
FMO03571.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 22:44:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5436767..5437048 | 315..34 | 1410 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:44:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
invader6 | 4885 | invader6 INVADER6 4885bp | 3525..3577 | 125..177 | 103 | 66 | Plus |
FMO03571.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:51 Download gff for
FMO03571.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31647-RA | 615..927 | 30..343 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:42 Download gff for
FMO03571.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5436684..5436711 | 316..343 | 100 | <- | Minus |
2L | 5436767..5437051 | 30..315 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:42 Download gff for
FMO03571.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5436684..5436711 | 316..343 | 100 | <- | Minus |
2L | 5436767..5437051 | 30..315 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:42 Download gff for
FMO03571.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5436684..5436711 | 316..343 | 100 | <- | Minus |
arm_2L | 5436767..5437051 | 30..315 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:42 Download gff for
FMO03571.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5436684..5436711 | 316..343 | 100 | <- | Minus |
arm_2L | 5436767..5437051 | 30..315 | 99 | | Minus |