FMO03577.5prime Sequence
483 bp (483 high quality bases) assembled on 2008-07-14
> FMO03577.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAGCGGATC
CAGGACAACCATTTTGCCCCAGTCGAAGGAGGCGCTTCTGAAGTCCTATA
ATGCGCGCCTCAAGGACGACGTTCGCAGCATGCTGGAGAATTTTGAAGAA
ATACTCAAGCTGGCGCGCCGTGAGAGCCACAGCCAGATTTCGAAGACCAC
GCAGTGCGAACAGGATGCCCTGGAAATGCAGGTCCGCGCGGCCAACATGG
TCCGTGCCGGCGAGTCTCTGATGAAGCTGGTGGCCGACCTAAAACAGTAC
CTAATCCTCAACGACTTTCACTCGGTCAACGAGGCCATCACAAACAATTC
GCAGCTGTTCAGGAACACACAGAGCGAGTGCGACAAGAAGCTGATGAAAC
TTAGGGACGAAATGGCCATGGACTTGTACGACCTGGAGGAGGAGTACTAC
ACCAGCATTTTTAAGGCAAGCTTTCTAGACCAT
FMO03577.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED22-RA | 602 | CG3034-RA | 78..506 | 37..465 | 2145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 928549..928764 | 250..465 | 1080 | 100 | Plus |
| X | 23542271 | X | 928216..928327 | 37..148 | 560 | 100 | Plus |
| X | 23542271 | X | 928382..928485 | 147..250 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:32 has no hits.
FMO03577.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:16:58 Download gff for
FMO03577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED22-RA | 71..512 | 27..471 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:24 Download gff for
FMO03577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED22-RA | 69..510 | 27..471 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:05 Download gff for
FMO03577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED22-RA | 69..510 | 27..471 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:05 Download gff for
FMO03577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 928207..928327 | 27..148 | 96 | -> | Plus |
| X | 928384..928485 | 149..250 | 100 | -> | Plus |
| X | 928550..928768 | 251..471 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:24 Download gff for
FMO03577.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 822240..822360 | 27..148 | 96 | -> | Plus |
| arm_X | 822417..822518 | 149..250 | 100 | -> | Plus |
| arm_X | 822583..822801 | 251..471 | 98 | | Plus |
