FMO03579.5prime Sequence
516 bp (516 high quality bases) assembled on 2008-07-14
> FMO03579.5prime
CGTATAGCATACCTTATACGAAGTTATCAATCCACATGGCGGCGATAAAG
AACCTCGCCCTGGGCCTTCTGTACGGCCTGTGGGACAACTTACTTGGCAT
GACACTGGTCCTGCACATCGACGACAAGGTGAACCGCCAGAATGCCGAGC
AGGAGCACCGCCAACTGCTGCTTCGCACCGACGAGGATCTTTACAAACGC
GCCATTAGATCGCCGCCTCCTTTGCCCAGTTCCGCGGCTGCCATGATTCG
GGAGGAGTATGCCGAGCAGGCGGAGGAAAACGCCGACTAGCGGACGCTAG
ATAAGATCCTGGGCAAGAAGCCAGCCGCCCAGAATCAACACACGCAGGGG
GAGAAGAAGATCGACAACAAGCTGTTCAAGTGCTGCATGCTCAATGGCGG
TTTCACCTGTGTGAGCATCCTCCTGTTCGAGAACGCTCTGCTGCCCACGC
TCAAATTCTGCCTTACCATCTTCTATGGACCCCATTCCCAAACCCTGCCG
GTGGGTTGGGGCTGGC
FMO03579.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tank-RA | 2077 | CG15626-RA | 179..659 | 36..516 | 1895 | 92.9 | Plus |
| tank-RB | 2213 | CG15626-RB | 315..795 | 36..516 | 1895 | 92.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4837234..4837535 | 350..49 | 1135 | 91.7 | Minus |
| 2L | 23513712 | 2L | 4836991..4837158 | 516..349 | 705 | 94.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:13:46 has no hits.
FMO03579.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:15:19 Download gff for
FMO03579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15626-RA | 166..656 | 27..516 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:11 Download gff for
FMO03579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15626-RB | 305..795 | 27..516 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:41 Download gff for
FMO03579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tank-RB | 305..795 | 27..516 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:41 Download gff for
FMO03579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4836991..4837157 | 350..516 | 94 | <- | Minus |
| 2L | 4837235..4837533 | 51..349 | 91 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:11 Download gff for
FMO03579.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4836991..4837157 | 350..516 | 94 | <- | Minus |
| arm_2L | 4837235..4837533 | 51..349 | 91 | <- | Minus |
