FMO03583.5prime Sequence
1212 bp (1032 high quality bases) assembled on 2008-07-14
> FMO03583.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGCTGTTTTCTG
CCTCTGGTGGCCCTGCTCTTGGCAGCGGGTGTCCACGCGGATGTCTCCCA
CCTGGACACAGATCTCCAGGAGGATGGCTATCATTACAAGCAGCCGTCGG
TGCCTTTTCCGCCTCCGGGATCGGGAAATGGCATTGAGGATTCGGGCATA
GGCCCAGGACCTGCTCCCTCGGCGCCGGCGCCGTCCTATGGGCCCCCGCA
GACGCGTCCTCCTCCTCCTCCTCCACCGCCACAGCCGACTCCACCAGCTC
CTCGTCCTTCCTATGGACCTCCTCAGACTCAGCCACCACGCCCTCCACCG
CAGCCAACTCCTTCGGCTCCTGCTCCGCCACCTCCATCCTATGGTCCTCC
GCAGACGCCTCCACCACGTCCTCCACCACAGCCAACTCCATCGGCTCCCG
CTCCACCACCATCTTATGGACCGCCGCAGACACCACCACCTCGTCCTCCA
CCGCAGCCAACACCTTCGGCTCCAGCTCCATCCTATGGACCTCCTCAGCC
TCAGCCACCGGCACCACAGCCACCATCGCCACCATCGCCACAACCTGGGC
CAGAGTACCTGCCTCCAGATCAGCCAAAGCCACGTCCAACGCCCTCGCGT
CCTCAGCCGCCTCCACCACCACCACCTAGGCCCCAGCCAACTCCTGGCTA
CGGACCACCACCGCCACCACCTCCGCCTAAGCCACAGCCTACTCCAGGAT
ACGGCCCTCCTACACCACCACCAGGACCAGGACCCGCTCAGCCGGCACCA
CAGCCGCCAAGACCACAGCCGCCACGCCCACAGCCACCACGGCCACAGCC
AGGATCTGAGTATTTGCCACCTCCTGGAGAAAATGAGGTCACCCCGACAC
AACGCAGCCAACTGCACCAGTGCCGGAATACGGACCACCACCGCCTGCAC
CTCCCGCTGGACCTACATACCAGCCACGCCACCAGCACACCAGCGCTGCA
CCAGGATCTACTTATCAACCCGCCCACAGCACCATCAGCGCTTGCACAGA
ACCACTTTACAGCACGCCCCCGGAGTCTCTGACCACCGGGCACACATATC
GCCAAACTCTGCACACCTGGAACTGTTCAGACCACTATAGCCACGTCGCA
GACACTTGACTGTCCGAATACGGACCACCACATCAGATAGGTGGTGGAAT
GAGAGCGCGCAT
FMO03583.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15021-RA | 1536 | CG15021-RA | 162..1246 | 29..1100 | 4905 | 97.6 | Plus |
CG15021-RA | 1536 | CG15021-RA | 438..588 | 383..530 | 385 | 84.1 | Plus |
CG15021-RA | 1536 | CG15021-RA | 516..663 | 305..455 | 385 | 84.1 | Plus |
CG15021-RA | 1536 | CG15021-RA | 367..509 | 387..529 | 250 | 78.3 | Plus |
CG15021-RA | 1536 | CG15021-RA | 520..662 | 234..376 | 250 | 78.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4436946..4437961 | 38..1047 | 4705 | 98.9 | Plus |
3L | 28110227 | 3L | 4437213..4437363 | 383..530 | 360 | 84.1 | Plus |
3L | 28110227 | 3L | 4437291..4437438 | 305..455 | 360 | 84.1 | Plus |
3L | 28110227 | 3L | 4437142..4437284 | 387..529 | 250 | 78.3 | Plus |
3L | 28110227 | 3L | 4437295..4437437 | 234..376 | 250 | 78.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:34:33 has no hits.
FMO03583.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:15:16 Download gff for
FMO03583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15021-RA | 155..1157 | 22..1020 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:44 Download gff for
FMO03583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15021-RA | 155..1157 | 22..1020 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:48 Download gff for
FMO03583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15021-RA | 155..1157 | 22..1020 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:48 Download gff for
FMO03583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4436946..4437932 | 38..1020 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:44 Download gff for
FMO03583.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4436946..4437932 | 38..1020 | 99 | == | Plus |