Clone FMO03583 Report

Search the DGRC for FMO03583

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:35
Well:83
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG15021-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03583.5prime Sequence

1212 bp (1032 high quality bases) assembled on 2008-07-14

> FMO03583.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGCTGTTTTCTG
CCTCTGGTGGCCCTGCTCTTGGCAGCGGGTGTCCACGCGGATGTCTCCCA
CCTGGACACAGATCTCCAGGAGGATGGCTATCATTACAAGCAGCCGTCGG
TGCCTTTTCCGCCTCCGGGATCGGGAAATGGCATTGAGGATTCGGGCATA
GGCCCAGGACCTGCTCCCTCGGCGCCGGCGCCGTCCTATGGGCCCCCGCA
GACGCGTCCTCCTCCTCCTCCTCCACCGCCACAGCCGACTCCACCAGCTC
CTCGTCCTTCCTATGGACCTCCTCAGACTCAGCCACCACGCCCTCCACCG
CAGCCAACTCCTTCGGCTCCTGCTCCGCCACCTCCATCCTATGGTCCTCC
GCAGACGCCTCCACCACGTCCTCCACCACAGCCAACTCCATCGGCTCCCG
CTCCACCACCATCTTATGGACCGCCGCAGACACCACCACCTCGTCCTCCA
CCGCAGCCAACACCTTCGGCTCCAGCTCCATCCTATGGACCTCCTCAGCC
TCAGCCACCGGCACCACAGCCACCATCGCCACCATCGCCACAACCTGGGC
CAGAGTACCTGCCTCCAGATCAGCCAAAGCCACGTCCAACGCCCTCGCGT
CCTCAGCCGCCTCCACCACCACCACCTAGGCCCCAGCCAACTCCTGGCTA
CGGACCACCACCGCCACCACCTCCGCCTAAGCCACAGCCTACTCCAGGAT
ACGGCCCTCCTACACCACCACCAGGACCAGGACCCGCTCAGCCGGCACCA
CAGCCGCCAAGACCACAGCCGCCACGCCCACAGCCACCACGGCCACAGCC
AGGATCTGAGTATTTGCCACCTCCTGGAGAAAATGAGGTCACCCCGACAC
AACGCAGCCAACTGCACCAGTGCCGGAATACGGACCACCACCGCCTGCAC
CTCCCGCTGGACCTACATACCAGCCACGCCACCAGCACACCAGCGCTGCA
CCAGGATCTACTTATCAACCCGCCCACAGCACCATCAGCGCTTGCACAGA
ACCACTTTACAGCACGCCCCCGGAGTCTCTGACCACCGGGCACACATATC
GCCAAACTCTGCACACCTGGAACTGTTCAGACCACTATAGCCACGTCGCA
GACACTTGACTGTCCGAATACGGACCACCACATCAGATAGGTGGTGGAAT
GAGAGCGCGCAT

FMO03583.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:34:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG15021-RA 1536 CG15021-RA 162..1246 29..1100 4905 97.6 Plus
CG15021-RA 1536 CG15021-RA 438..588 383..530 385 84.1 Plus
CG15021-RA 1536 CG15021-RA 516..663 305..455 385 84.1 Plus
CG15021-RA 1536 CG15021-RA 367..509 387..529 250 78.3 Plus
CG15021-RA 1536 CG15021-RA 520..662 234..376 250 78.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:34:32
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4436946..4437961 38..1047 4705 98.9 Plus
3L 28110227 3L 4437213..4437363 383..530 360 84.1 Plus
3L 28110227 3L 4437291..4437438 305..455 360 84.1 Plus
3L 28110227 3L 4437142..4437284 387..529 250 78.3 Plus
3L 28110227 3L 4437295..4437437 234..376 250 78.3 Plus
Blast to na_te.dros performed on 2014-11-28 20:34:33 has no hits.

FMO03583.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-14 18:15:16 Download gff for FMO03583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15021-RA 155..1157 22..1020 98 == Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:44 Download gff for FMO03583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15021-RA 155..1157 22..1020 98 == Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:48 Download gff for FMO03583.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15021-RA 155..1157 22..1020 98 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:48 Download gff for FMO03583.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 4436946..4437932 38..1020 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:44 Download gff for FMO03583.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4436946..4437932 38..1020 99 == Plus